Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2272 ATGAAGGAGAAAGGGAATGGAAATGGAGGGAGGCAGAGGGACACGTGGCGGCGTGGGAGAGCCCAGAAGAACCCCAACGTTGGTTCTGATTGGAAATTAAGAGGGTTTGCGATATCTTCTAAAGTGTCGACCCAGGGGGCTGGGGTTGATGCTCCATCGCCAGGTTCTTCACCGCCCGCCAATAATACAAATTCTCCGCCTCCAAATCCCTCGCCGCCGCCTCCGCCGCTGCATTCGCCACCTTCGCCGCCCCATTCGCCGCCGTCGCCATCCGAATCTGCCCCGCCGCCGCCGAAGGATAGTCCTTCCCCGCCTTCATCTACCCCACCGTCGCCCCCCCAAAATGCTCCACCGAATTCAACTTCGACGCCGCCGCCCTCTTGGTCACCACCCCCATCTTCACGGCCACCGCCACCGTCGTCTCCTCCTCCCTCTGAAGAGTCACCTCCAGCACAATCACAGCCTCCACCAACACAACCCTCATCACCGCCCGATAAGTCTTCTCCGCCTTCATCCACATCTGCAACTCCACCTCCACCTCCGCCTTCACCGGTGAAGTCATCTGATTCACCTCCACAGGCTCCGGCTCCCACCCATGATTCACCTGCCGATGGAACCTACGCCAAATTATCGCCTCCACCTCCAACAACTCCTTACCCTGAAGGTGCTATTCCCCCACCGAATGCGCCCATCTCCCCTCAGCCGCCACCGCCTGGGTCACCGAAGTCACGGGGCTCAAGCGATTCTTCGAGTAGCTCGTCATCGTCAGGAGGCGGCGGTAATGATAATTCAGTAAAATACATCGGCTATGCAATGGCCGGAGTGCTCGCTTTAATCCTTGTTGCCTTTATTATTTTTTTTGCGGTAAAGAGGAGGAGAAAACGAAGGCACCCCCATACTCCACTTTATGGACCCCCTAATGGCTTCCCGAAGAAACCAGGTATACTGTTTGTGGACAATTTCTGTTCTGCTGCTGCATTGTACATCTCATTTTGCGCAGAAGGGCTTTACTATGCACAAGAGGGCTATTATGGTTCGCTAAGTCCAATCTCTCCCAACTATGGAACTGGGAGTCAAAGAGGAGTTGTGCAACATTTAGGGGGTACAGACTCAGGGCCTTGGAATACTGCTCAGAAAGCTTATAGCTATGAGCAGCTTATGGAAATAACTCAAGGATTTTCATATGAAAATATTATTGGAGAGGGGGGATTCGGATGTGTGTACAAGGGTTGGCTTCCAAGTGGAAAAGCAGTGGCCGTGAAGCAGCTTAAGGTTGGGAGTGGCCAAGGTGAACGGGAATTTAGGGCAGAGGTTGATATTATCAGCCGTGTTCATCATCGGCATTTAGTATCGTTAGATGGTTATTGCATAGCTGATCAGCGAAGAATGCTTATCTATGAGTTTCTTCCCAATAAAACTCTCGAACATCACTTGCATGCCACTGGAGTGCCAGTGTTAGATTGGAGCAAGAGGATGAAGATAGCAATTGGAGCTGCCAAAGGCCTAGCATATTTGCATGCAGACTGCAACCCAAAGATTATCCACAGAGATATTAAGTCGGCAAATATACTTTTGGATAATGCATATGAGGCACAGGTTTCAGACTTCGGACTTGCCAGGCTAACTGATGATGCTAATACGCACGTATCAACCCGGGTTATGGGGACCTTCGGGTACCTGGCTCCAGAGTATGCAACAAGCGGAAAATTGACAGATAGATCCGATGTTTTCTCCTTTGGAGTTGTCCTCCTTGAACTCATAACTGGGAGGAAACCTGTTGATCAAACTCAGCCTGTTGGAGAAGAGAGTTTGGTTGAGTGGGCTCGCCCACTTCTCCATCATGCTGTTGAAACCCGAGATTTTAGTAAATTAGTAGACGAAAGGCTTGATATGCAATTTGTGGAGAATGAGATGTGCAGAATGATTGAAGCTGCTGCAGCCTGTGTTCGCCATTCTGCTCCAAAAAGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTGGATTGTCAAGACGAATCATGTGATTTATCAAATGGGGTAAAATATGGTCAGAGCACCGTTTATGACTCCAGCCAATATAGTGAAGACATTATAATGAGATTCAGGAAGATGGCCACTGGCAGCTCTGGTGATTCTGAATTTGATATGAACAGTGGAGAATACACTTCTTCCTCATTAGAGTATTCTGGACAACAGCTTGCATCAGACAAGGGTGATTCAAGCAGCGAGTCGGAGTCTCGTGCTTTCACTGCAAATAGGAGAAATACTGAGCAAGGGCAAATAAGAGGGAACACACAAAGTAGCAAAGCCAAAATTGTTACCTTTTCTAGTGCTGTTCTTTCGAAAAGCATTCTTTTCACCCCCCAAAAGAAAGAAGCTGAAACCAAATGGGACACAAGACTGCCTTTGCTTGCAAGTTGA 2418 0.493 MKEKGNGNGGRQRDTWRRGRAQKNPNVGSDWKLRGFAISSKVSTQGAGVDAPSPGSSPPANNTNSPPPNPSPPPPPLHSPPSPPHSPPSPSESAPPPPKDSPSPPSSTPPSPPQNAPPNSTSTPPPSWSPPPSSRPPPPSSPPPSEESPPAQSQPPPTQPSSPPDKSSPPSSTSATPPPPPPSPVKSSDSPPQAPAPTHDSPADGTYAKLSPPPPTTPYPEGAIPPPNAPISPQPPPPGSPKSRGSSDSSSSSSSSGGGGNDNSVKYIGYAMAGVLALILVAFIIFFAVKRRRKRRHPHTPLYGPPNGFPKKPGILFVDNFCSAAALYISFCAEGLYYAQEGYYGSLSPISPNYGTGSQRGVVQHLGGTDSGPWNTAQKAYSYEQLMEITQGFSYENIIGEGGFGCVYKGWLPSGKAVAVKQLKVGSGQGEREFRAEVDIISRVHHRHLVSLDGYCIADQRRMLIYEFLPNKTLEHHLHATGVPVLDWSKRMKIAIGAAKGLAYLHADCNPKIIHRDIKSANILLDNAYEAQVSDFGLARLTDDANTHVSTRVMGTFGYLAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDQTQPVGEESLVEWARPLLHHAVETRDFSKLVDERLDMQFVENEMCRMIEAAAACVRHSAPKRPRMVQVVRALDCQDESCDLSNGVKYGQSTVYDSSQYSEDIIMRFRKMATGSSGDSEFDMNSGEYTSSSLEYSGQQLASDKGDSSSESESRAFTANRRNTEQGQIRGNTQSSKAKIVTFSSAVLSKSILFTPQKKEAETKWDTRLPLLAS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2272 805 MobiDBLite consensus disorder prediction 1 20 - -
Bisa11g2272 805 FunFam Proline-rich receptor-like protein kinase PERK8 368 468 - -
Bisa11g2272 805 SUPERFAMILY Protein kinase-like (PK-like) 374 666 IPR011009 -
Bisa11g2272 805 PRINTS Proline rich extensin signature 105 130 - -
Bisa11g2272 805 PRINTS Proline rich extensin signature 68 84 - -
Bisa11g2272 805 PRINTS Proline rich extensin signature 47 68 - -
Bisa11g2272 805 PRINTS Proline rich extensin signature 87 104 - -
Bisa11g2272 805 Gene3D Transferase(Phosphotransferase) domain 1 469 684 - -
Bisa11g2272 805 MobiDBLite consensus disorder prediction 706 767 - -
Bisa11g2272 805 ProSiteProfiles Protein kinase domain profile. 393 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2272 805 CDD STKc_IRAK 399 667 - -
Bisa11g2272 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Bisa11g2272 805 FunFam proline-rich receptor-like protein kinase PERK8 469 681 - -
Bisa11g2272 805 MobiDBLite consensus disorder prediction 709 767 - -
Bisa11g2272 805 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Bisa11g2272 805 SMART serkin_6 393 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2272 805 MobiDBLite consensus disorder prediction 1 260 - -
Bisa11g2272 805 MobiDBLite consensus disorder prediction 208 242 - -
Bisa11g2272 805 Gene3D Phosphorylase Kinase; domain 1 364 468 - -
Bisa11g2272 805 Pfam Protein tyrosine and serine/threonine kinase 395 666 IPR001245 GO:0004672|GO:0006468
Bisa11g2272 805 MobiDBLite consensus disorder prediction 243 260 - -
Bisa11g2272 805 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 273 721 IPR047117 -
Bisa11g2272 805 MobiDBLite consensus disorder prediction 59 198 - -
Bisa11g2272 805 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2272 Bisa-ChrBisa11 46743778 46748982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2272 129 721 Trihelix Transcription Factor Family AT1G70460 53.670 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa11g2272 PK_Tyr_Ser-Thr 9.6e-47 CL0016