Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2247 ATGGTAGTGGAATCACCGGGACTGAGCGGAGCAAGGCTAGAATCCAACAAGACCTTCTCATGGAATTTGTGGGGATTAACAGAGTTGCTTTTCAATGGAGGAGTGAAGGTCTTGTCTGGTAAGAGTGGTATGGAAATTATCTGTTCGATTTTCTGGCTTCTGGGTTTTCTGCTTCTGGTGTCCACAGGGATTTCCTTCGCCGCGCTTTCTCCTTCTGGGATAAACTATGAAGTTGTTGCTCTGATGGCCATAAAAGATGACTTGATTGATCCCCACAATGTGCTGGAGAATTGGGATATGAACTCTGTCGATCCTTGTAGCTGGAGGATGGTTACTTGTTCTCCAGATGGCTACGTGTCTGCTTTGGGATTTCCTAGTCAGAACTTGTCTGGCACGCTATCTCCTGGGATTGGAAACCTAACAAACTTGCAATCTGTATTGCTTCAGAACAATGACATTTCTGGTCCAATTCCTGATGCAATAGGAACGCTGGAAAAGCTTCAGACACTTGATCTTTCCAATAATTCATTTAGTGGCGAGATACCCGGTTCTCTGGGAGAACTTAAGAACCTGAATTATCTGCGGTTAAACAATAACAGTTTCGCAGGAGTCTGCCCTCAATCCCTTGGCAACATTGAAGGTCTAACCCTTGTGGACTTATCTTATAACAATCTGAGTGGTCCTTTGCCAAGAATATCAGCAAGAACATTCAAGATTGTGGGAAACCCTTTAATTTGTGGTCCAAAGGCAAATAACTGTTCTACTGTTTTGCCAGAGCCGCTTTCCTTTCCGCCAGATGCTCTAAGAGCCCAATCAGACTCCGTAACAAAAAGCCAACGGGTAGCAGTAGCTTTTGGTGCAAGTTTTGGTGCTGCTTTTGTTATTGTGATTATTGTTGGGGTTCTTGTTTGGTGGCGGTACAGACACAACCAGCAGATATTCTTTGATGTTAATGAGCAATATGACCCAGAGGTGCGCCTTGGTCATCTAAAAAGATACTCATTCAAAGAGCTTCGAGCAGCAACAGACCATTTCAATTCAAAGAACATTCTAGGAAGAGGTGGCTTTGGAATAGTGTACAAGGGGTGCTTGAATGACGGATCTATAGTGGCAGTAAAAAGGCTGAAGGACTATAATGCAGCTGGTGGCGAGATCCAATTCCAGACAGAAGTTGAGACAATAAGTTTGGCTGTCCACAGGAATCTTCTGCGGCTTTCTGGGTTTTGCAGCACTCAGAATGAAAGACTCCTCGTTTATCCATACATGCCCAACGGCAGTGTAGCCGCTCGATTAAAAGATCATATTGATGGTGAGGCTGCTTTAGATTGGGTGAGGCGAAAGAGAATAGCTTTAGGTACAGCAAGAGGGTTGGTTTATTTGCACGAGCAGTGTGACCCTAAGATTATTCACCGTGATGTCAAAGCTGCTAACATATTGCTGGATGAAGACTTTGAAGCAGTTGTTGGTGATTTTGGCTTGGCAAAGCTTCTGGATCATAGAGATTCCCACGTGACCACAGCTGTGCGTGGCACAGTTGGTCACATTGCTCCAGAATACTTGTCCACAGGTCAGTCATCAGAAAAGACCGACGTGTTTGGGTTTGGAATCTTGCTTCTTGAGCTCATCACAGGTCATAAGGCTTTGGACTTTGGACGAGCAGCCAACCAGAAAGGTGTAATGCTTGATTGGGTGAAGAAGCTTCATGAAGAGGGAAGATTAAGCCAAATGGTGGATAAAGATTTGAAGGGAAAGTATGACGTGATAGAACTGCAAGAAATGGTTCAGGTTGCACTGTTATGCACACAGTTCAATCCTTCTCACAGGCCCAAGGTGTCAGAAGTATTGAAGATGCTGGAAGGCGATGGCCTAGCCGAGAGATGGGAAGCGTCACAGAAGATTGAGACGCCGAGATTCCGGTCTTGTGAAAACCCTCCCTTAAGATATTCAGATTTTATAGAAGAATCTTCACTCATAGTAGAAGCCATGGAGCTTTCTGGTCCTAGGTGA 2007 0.4474 MVVESPGLSGARLESNKTFSWNLWGLTELLFNGGVKVLSGKSGMEIICSIFWLLGFLLLVSTGISFAALSPSGINYEVVALMAIKDDLIDPHNVLENWDMNSVDPCSWRMVTCSPDGYVSALGFPSQNLSGTLSPGIGNLTNLQSVLLQNNDISGPIPDAIGTLEKLQTLDLSNNSFSGEIPGSLGELKNLNYLRLNNNSFAGVCPQSLGNIEGLTLVDLSYNNLSGPLPRISARTFKIVGNPLICGPKANNCSTVLPEPLSFPPDALRAQSDSVTKSQRVAVAFGASFGAAFVIVIIVGVLVWWRYRHNQQIFFDVNEQYDPEVRLGHLKRYSFKELRAATDHFNSKNILGRGGFGIVYKGCLNDGSIVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLSGFCSTQNERLLVYPYMPNGSVAARLKDHIDGEAALDWVRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHEEGRLSQMVDKDLKGKYDVIELQEMVQVALLCTQFNPSHRPKVSEVLKMLEGDGLAERWEASQKIETPRFRSCENPPLRYSDFIEESSLIVEAMELSGPR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2247 668 Pfam Protein kinase domain 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2247 668 SUPERFAMILY L domain-like 75 236 - -
Bisa11g2247 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Bisa11g2247 668 SMART serkin_6 345 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2247 668 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Bisa11g2247 668 SUPERFAMILY Protein kinase-like (PK-like) 322 619 IPR011009 -
Bisa11g2247 668 FunFam Somatic embryogenesis receptor kinase 1 314 421 - -
Bisa11g2247 668 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Bisa11g2247 668 FunFam Somatic embryogenesis receptor-like kinase 1 422 638 - -
Bisa11g2247 668 FunFam Putative LRR receptor-like serine/threonine-protein kinase 74 255 - -
Bisa11g2247 668 Gene3D Ribonuclease Inhibitor 74 255 IPR032675 -
Bisa11g2247 668 ProSiteProfiles Protein kinase domain profile. 345 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2247 668 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 52 629 - -
Bisa11g2247 668 Pfam Leucine rich repeat N-terminal domain 75 114 IPR013210 -
Bisa11g2247 668 Gene3D Phosphorylase Kinase; domain 1 314 421 - -
Bisa11g2247 668 Gene3D Transferase(Phosphotransferase) domain 1 422 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2247 Bisa-ChrBisa11 46378978 46384714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2247 110 668 Receptor kinase-like Gene Family AT1G60800 76.937 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa11g2247 Pkinase 2.6e-44 CL0016