Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2242 ATGAACTCCTCCTCGCAACCCCCGAACTTCGCTCTTCCGGTGGACTCCGAACACAAAGCCACCAAGTTCACGCCATTCTCACTCGCCAACCCCCACATGCGTGCCTTCCACCTCTCCTGGGTCTCCTTCTTCTCCTGCTTCGTCTCCACCTTCGCCGCCCCCCCTCTCCTCCCCGTCATCCGCGACAACCTCAACCTCGCCTCCTCCGTCTCCGGCGCAGTCTTCGCCCGCCTCGCCATGGGCGCGGCCTGCGACCTCCTCGGCCCCCGCCTGGCCTCCGCCTCCCTCTCCCTCCTCACCTCCCCAGCCGTCTTCCTCACCGCCACCGTCTCCTCAGCCACCTCGTTCCTGCTCGCCCGCTTCTTCGCCGGCTTCTCCCTCGCCACTTTCGTCTCCACCCAGTTCTGGATGAGCTCCATGTTCTCCTCCTCCGCGGTCGCCTCCGCCAACGGATTCGCCGCCGGCTGGGGTAACCTCGGCGGAGGCGCCACCCAGCTCATAATGCCGCTAGTCTTCGACGCCATTCAAGCAGCCGGAGCGACGCAATTCATGGCCTGGCGCATCGCGTTCTTCGTTCCCGCGCTTTTTCAGATACTGACGGCTTTTGCGGTGCTGACGTTCGGACAGGACGCGCCGGACGGGAACTTCCAGGGACTGAAGAAGTCGGGGGAGAAGGCGAAGGACGATTTGTGGAAGGTGTTGTATAACGGGGTCACGAATTACAGAGGGTGGATTTTGGCGCTGACGTACGGGTACTGTTTTGGGGTGGAACTGACGGTGGATAACATCATAGCGGAGTATTTTTTTGACAGGTTTGACCTGAAGCTTCGGACGGCGGGGATGGTGGCGGCGAGCTTCGGGATGGCGAACGTGGCAGCGAGGCCGGCGGGAGGGTACGTGTCGGATTGGATGGGAAGGAGGTTTGGGATGAGGGGGAGGCTGTGGGCGTTGTGGGTGTGCCAAACAGTGGGAGGCGTGATGTGCGTCGTCCTGGGGCTCGTAGGGTCGTTGGGGGGCTCCATTACTGTGATGATCATCTTCTCTGTGTTCGTTCAAGCGGCCTGTGGGCTCACTTTTGGTGTGGTTCCTTTCGTCTCCAGAAGGTCACTGGGGGTGATATCAGGAATGACAGGAGGGGGAGGGAATGTGGGTGCAGTGTTGACGCAACTAATATTCTTCAAAGGATCAACGTTCTCAAAGGAAAGAGGGATAACGCTGATGGGAGTGATGATAGTGATATGCACACTCCCAATATGTCTCATTCACTTCCCTCAATGGGGAAGCATGTTTGTGGGGCCATCAGCCTCCAAGAAGGTCACAGAGGAAGACTATTACCTCTCTGAATGGAACTCAAAGGAGCAGCACAGAGGCTGCCATGAGGCTAGCTTGAAGTTTGCTCGTAACAGCATGTCCGAAAGAGGCAGATCATCCTCACTACTCAGCTCTTCCACTAATGTCTGA 1461 0.5852 MNSSSQPPNFALPVDSEHKATKFTPFSLANPHMRAFHLSWVSFFSCFVSTFAAPPLLPVIRDNLNLASSVSGAVFARLAMGAACDLLGPRLASASLSLLTSPAVFLTATVSSATSFLLARFFAGFSLATFVSTQFWMSSMFSSSAVASANGFAAGWGNLGGGATQLIMPLVFDAIQAAGATQFMAWRIAFFVPALFQILTAFAVLTFGQDAPDGNFQGLKKSGEKAKDDLWKVLYNGVTNYRGWILALTYGYCFGVELTVDNIIAEYFFDRFDLKLRTAGMVAASFGMANVAARPAGGYVSDWMGRRFGMRGRLWALWVCQTVGGVMCVVLGLVGSLGGSITVMIIFSVFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGAVLTQLIFFKGSTFSKERGITLMGVMIVICTLPICLIHFPQWGSMFVGPSASKKVTEEDYYLSEWNSKEQHRGCHEASLKFARNSMSERGRSSSLLSSSTNV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2242 486 FunFam Nitrate transporter 2.1 227 428 - -
Bisa11g2242 486 Gene3D MFS general substrate transporter like domains 29 216 IPR036259 -
Bisa11g2242 486 Gene3D MFS general substrate transporter like domains 228 426 IPR036259 -
Bisa11g2242 486 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 3 476 IPR044772 GO:0015112
Bisa11g2242 486 CDD MFS_NRT2_like 36 420 IPR044772 GO:0015112
Bisa11g2242 486 SUPERFAMILY MFS general substrate transporter 3 421 IPR036259 -
Bisa11g2242 486 Pfam Major Facilitator Superfamily 41 387 IPR011701 GO:0022857|GO:0055085
Bisa11g2242 486 ProSitePatterns Sugar transport proteins signature 1. 297 312 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2242 Bisa-ChrBisa11 46297941 46302298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2242 7 478 Inorganic Solute Cotransporters AT1G12940 71.310 0.0 709