Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2215 ATGAGAATCAGAGAGGACAAAAGAGCTGTTTGTGCTCTACAACATCGCATGCAAGAAGCAAAGAATGAGAGCTTGATTCCGTTTCTACGAAATGTTTTACTTTCTTATTTAGAAGTAGGACCTGACGAGATTGCGTGTAAGAGAGAGGGGCAGAGATCAGAGATGACGACCCGCTTCAAGAAGAACCGCAAGAAGCGCGGCCACGTGAGTGCCGGTCACGGTCGTATTGGCAAGCACAGGAAGCACCCTGGTGGTCGTGGTAACGCCGGTGGTATGCACCACCACCGGATCCTCTTCGACAAATATCATCCTGGGTATTTCGGTAAAGTGGGTATGCGCTATTTCCACAAGCTACGCAACAAGTTCTACTGCCCCATCGTCAACATCGACAAGCTGTGGTCGTTGGTGCCTCAGGAGTTGAAGGAGAAGGCCTCCAAGGACAATGTTCCCATGATCGATGTCACCCAATACGGATACTTTAAGGTTTTGGGCAAAGGTGTTTTGCCGGAGAACAAGCCAGTTGTGGTGAAGGCCAAACTCGTCTCCAAGATTGCAGAGAAGAAGATTAAGGAGGCTGGCGGCGCTGTGGTTCTCACCGCTTAG 603 0.5008 MRIREDKRAVCALQHRMQEAKNESLIPFLRNVLLSYLEVGPDEIACKREGQRSEMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLWSLVPQELKEKASKDNVPMIDVTQYGYFKVLGKGVLPENKPVVVKAKLVSKIAEKKIKEAGGAVVLTA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2215 200 Gene3D - 112 200 - -
Bisa11g2215 200 SUPERFAMILY Ribosomal proteins L15p and L18e 60 199 IPR036227 -
Bisa11g2215 200 Hamap 50S ribosomal protein L15 [rplO]. 55 199 IPR030878 GO:0003735|GO:0006412|GO:0015934
Bisa11g2215 200 MobiDBLite consensus disorder prediction 51 88 - -
Bisa11g2215 200 ProSitePatterns Ribosomal protein L15 signature. 161 193 IPR001196 GO:0003735|GO:0005840|GO:0006412
Bisa11g2215 200 FunFam 60S ribosomal protein L27a 112 200 - -
Bisa11g2215 200 MobiDBLite consensus disorder prediction 58 88 - -
Bisa11g2215 200 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 82 197 IPR021131 -
Bisa11g2215 200 PANTHER 60S RIBOSOMAL PROTEIN L27A 55 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2215 Bisa-ChrBisa11 45988160 45989138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2215 55 200 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 89.726 3.29e-97 277