Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2214 ATGGCGTCGTCCATGGCTCTGCTTCTTCGTGGTTATCAACCTCAGTTACTGTCTTCAATCCGTCAAGAACATAGTAATAAGCCTTTGATCAGAGTTTCTGACCAACGTTATCGTTTCGCCGCTAATACTAGAATAGGACTGGGTCTGTCCACTCCTGCTTTCAGTTTCAGGCGCATTCTGGTGAGCCATCCAAGATCATCATCCATAAATGGGGTTTTCGTTCAGAATGATATAGATACTTCGAAAGAAGGCCGCAGAGAGGATGAAGACGATGTTGAATTTTTGGAGAGGCTCGGGAGATGGGCTGGTTTCCTCCCTTCGATTTTGCCTGGTGGAAGCTGGTGGAATTTCTCCGATGACGTCGAGGTTCAGGTTTTAGCTAAGCCGGTAACTGTTTGGCGCGCGCTTGCCAAAATGTGGGAGCTGGTTGAGCAAGACCGCTGGGTTATTTTCACGGCATTCTCGACTGTGGTTCTAGCAGCGGTTTCGGAGATTTCCATACCCCATTTCTTAACTGCAACCATCTTCTCCGCTCAGGCCGCCCAGACTACAGTCTTCCGTCGGAATGTGCGTCTCTTGGTTCTATTGTGTCTGACTTCGGGAATATGCAGTGGGATACGAGGATGCTGTTTTGGCATTGCAAATATGATTTTGGTTAAGAGGATGAGAGAAACATTGTACTCTTCCCTTCTTCTTCAGGATATATCATTTTTTGACTCTGAAACGGTTGGCAATTTGACAAGCAGGCTTGGAGCAGATTGTCAACAAGTGTCACGAGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGAACAGGTGCATTGATCTACCTGTTGATTTTGTCATGGCCACTTGGTTTATGTACATTGGTTATATGCGCTATATTATCCGCTGTTATGCTATTTTATGGAAGGTATCAAAAAAAGGCTGCGAAGTTGATCCAAGAAGTCACTGCTTCTGCAAACGAAGTAGCTCAAGAGACATTTTCTCTCATTAGGACTGTCCGTGTTCATGGAACAGAAGTAGAAGAACTTGGAAGATACAAATGGTGGTTGCAGAAGTTAGCTGATATAAGCTTGCGACAAAGTGCTGCATATGGATTCTGGAATTTCAGTTTCAACACTTTATATCATTCAACTCAGGTTATTGCCGTGCTATTTGGAGGAATGTTCATTCTAGCAGGTCATATCACAGCAGAGAAACTTACCAAGTTCATACTATACAGTGAATGGCTAATTTATTCAACCTGGTGGGTTGGAGACAATATATCCTCGTTGATGCAATCAGTTGGAGCTAGTGAAAAGGTATTTCATTTGATGGATCTCTTGCCAAGCAGCCAATACATAGCAAGGGGGGTAAAGTTGCAGAGAGTAATGGGGCATATTGAATTCATAGATGTTTCTTTTCACTATCCTTCAAGGCCAATGGTACCTGTAGTGCAAAATGTGAGCTTTTCTGTTCATCCTGGTGAGGTGGTTGCAATTGTTGGCCTTAGTGGTAGTGGAAAAAGCACACTGGTAAACCTTTTGCTCCGTCTATATGAGCCAACAAATGGTCAGATTTTGATTGATGGCTACCCTCTTGAGGAGTTGGACATCATGTGGTGGAGAGAAAGAATTGGATTTGTGGGACAGGAGCCGAAACTCTTTCGCATGGATATTAGTTCAAACATCAGATATGGATGCACTCGAGATTTAAAGCAGGAGGATGTTGAATGGGCTGCCAAGCAGGCCTATGCTCATGGCTTCATCTCAGCACTTCCTAATGGTTATGAAACACTTGTTGATGATGATCTGTTGAGTGGGGGACAAAAGCAGAGAATTGCTATTGCTAGGGCCATTCTTAGGGACCCAACTATTTTGATCCTTGATGAAGCTACCAGTGCACTTGATGCTGAGAGTGAATATAATGTCAAGGGTGTTCTTCGATCTGTTAGAAGCGATTCCACGACAAGGAGAAGCGTCATAGTCATTGCACATAGGCTTTCTACCATAAAAGCAGCCGACAGGATTGTGGTAATGGATGGTGGTCGAGTTGTTGAGAATGGAAGTCACAGGGAACTTCTCTTAAAAGATGGTTTGTATGCACGATTGACTAGGAAACAGGCTGACGCAGAAGAAAGTAGAAACGGGTGCCGTTCTAATGAAACATTTGGATTCCTTAACTTGAAACTACAGGCTATGCTGAAGCGTGTTTTTAACTCATTAGGCCGGGTGGAGCACAATGACAGAAAACCCAGAAGGAAAAAACAACTTAAAGGTGCTACTGCTAAGGCATCCCTGGACTTCAGCTTTCAGTCAGAGAAAATTTTTGTGAAGATAGTTCATGCAGGAGGGCAAAAGGAACTGTATCAGCAAGCAGTTCCTGCATCTAAGTTGATGGACAAATATCCTGGGATGTGTGTGGCCCTCCCAGAAGTCTTTAAACATCCTCACCAGTCAGTACTATGGCCAGAAGAGTTTTTAATGCCCGGTCAGAAGTATATTATAATCTCATCCAAAGCTGTGGAGAAGCTGAAGCGTAAATATCCTGAGGAAGGCAAAACCCTATTGAAAGCTAACATCACCCATTCTCCAGATGGTGAAGTCGAAGTGGGTAAGACAGTATGCCATGAGATTCTTGAGTCAAAGATCACTTTGTCTCCAAGTAAAACAGAAGAGGAGGGTGAAGCCAAAGAGGCAAACAAAGGAAGTACTGTGGAGGAAGCGTTTTGTTCTGCCAAGGACTTCTATGTGTCTAAGGATAAGTGGGCAATACTTCCAAAGCGAAAAGGAATAAAAGGGAAGAAGCCATTTATGCCACCTCTTCCAAAGGAAAAACCTTTTCGGATTTTGGGATGGCAACCCAGCCTCTCCACTGTGAAAGAGCTCTCCCCATGA 2892 0.4374 MASSMALLLRGYQPQLLSSIRQEHSNKPLIRVSDQRYRFAANTRIGLGLSTPAFSFRRILVSHPRSSSINGVFVQNDIDTSKEGRREDEDDVEFLERLGRWAGFLPSILPGGSWWNFSDDVEVQVLAKPVTVWRALAKMWELVEQDRWVIFTAFSTVVLAAVSEISIPHFLTATIFSAQAAQTTVFRRNVRLLVLLCLTSGICSGIRGCCFGIANMILVKRMRETLYSSLLLQDISFFDSETVGNLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLILSWPLGLCTLVICAILSAVMLFYGRYQKKAAKLIQEVTASANEVAQETFSLIRTVRVHGTEVEELGRYKWWLQKLADISLRQSAAYGFWNFSFNTLYHSTQVIAVLFGGMFILAGHITAEKLTKFILYSEWLIYSTWWVGDNISSLMQSVGASEKVFHLMDLLPSSQYIARGVKLQRVMGHIEFIDVSFHYPSRPMVPVVQNVSFSVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGYPLEELDIMWWRERIGFVGQEPKLFRMDISSNIRYGCTRDLKQEDVEWAAKQAYAHGFISALPNGYETLVDDDLLSGGQKQRIAIARAILRDPTILILDEATSALDAESEYNVKGVLRSVRSDSTTRRSVIVIAHRLSTIKAADRIVVMDGGRVVENGSHRELLLKDGLYARLTRKQADAEESRNGCRSNETFGFLNLKLQAMLKRVFNSLGRVEHNDRKPRRKKQLKGATAKASLDFSFQSEKIFVKIVHAGGQKELYQQAVPASKLMDKYPGMCVALPEVFKHPHQSVLWPEEFLMPGQKYIIISSKAVEKLKRKYPEEGKTLLKANITHSPDGEVEVGKTVCHEILESKITLSPSKTEEEGEAKEANKGSTVEEAFCSAKDFYVSKDKWAILPKRKGIKGKKPFMPPLPKEKPFRILGWQPSLSTVKELSP 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2214 963 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 151 432 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa11g2214 963 Pfam PADRE domain 773 960 IPR025322 -
Bisa11g2214 963 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 466 705 IPR003439 GO:0005524
Bisa11g2214 963 PANTHER ABC TRANSPORTER B FAMILY 143 705 IPR039421 -
Bisa11g2214 963 Gene3D - 456 707 IPR027417 -
Bisa11g2214 963 FunFam Multidrug ABC transporter ATP-binding protein 458 710 - -
Bisa11g2214 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 458 706 IPR027417 -
Bisa11g2214 963 ProSitePatterns ABC transporters family signature. 604 618 IPR017871 GO:0005524|GO:0016887
Bisa11g2214 963 SUPERFAMILY ABC transporter transmembrane region 138 448 IPR036640 GO:0005524|GO:0016020
Bisa11g2214 963 Gene3D ABC transporter type 1, transmembrane domain 122 296 IPR036640 GO:0005524|GO:0016020
Bisa11g2214 963 FunFam ABC transporter B family member 26, chloroplastic 132 451 - -
Bisa11g2214 963 Pfam ABC transporter 485 632 IPR003439 GO:0005524
Bisa11g2214 963 SMART AAA_5 493 682 IPR003593 GO:0016887
Bisa11g2214 963 Pfam ABC transporter transmembrane region 154 417 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa11g2214 963 Gene3D ABC transporter type 1, transmembrane domain 297 713 IPR036640 GO:0005524|GO:0016020
Bisa11g2214 963 CDD ABC_6TM_TAP 153 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2214 Bisa-ChrBisa11 45977393 45987785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2214 221 712 Calmodulin-binding Proteins AT2G36910 34.331 1.01e-70 254