Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2181 ATGATTGCTTCGAAGCTCTCTGAATCAGATGATAATGAAATGGAAAACCATAAACTTCCATATTTAAGGTCGCTACCGAAACCTGATTGCTGGAGACTTCCACTCTCTTGCAATATAAACAGGCCAACAAATGCCTTATCTTGCAAATCCCGAGCTTTCAAGTGTCATTCTTTTCTAGTACCAGGCCAATTAAGTGAATTACCTGTTGTTAAGGTGGCTACCACAGCACTGGCAAGGTCCTATAATGTGTCACAAAGTAGTCGTGTCATGGTAAAGCTAATTCCAGCAGTTGGCATTATCATATTTGCGATATGGGGTGTTAGCCCATTAATATGTCAAACAAGAAAACTGCTTTTTCAGAGGGGTGATAACAATTGGAAGAAAAGTACGACAAAATATGTAGTAACCTCTTATCTTCAACCGTTACTGTTATGGACTGGAGTTATACTTATTTGCAGCGCTCTAGAGCTAATAGTTCTACCTACAGAAAATAGCCAGGTTGTTAAGGAACGATTTTTGAATTTTGTAAGATCATTGTCAACTGTGCTTTCATTCGCCTATTGTCTATCAAGTGTGATTCAACAAGCACAGAAATTATTTATTGAGAGAGCTGATGCCAGTGAGACAAGAAATATAATTACGAACTTCCTTTCTAGTGCGATGATTCATGCAACTCGGCCTTTTGTGGTGAATGAATGGATTCAATCAAGTATTGAAGGATATGAAGTTTCTGGTACTGTAGAGCATGTTGGCTGGTGGTCACCAACAATTATAAGGGGTGAAGATCGTGAAGCCGTTCACATTCCAAACCACCAGTTTACAGTGAACATTGTGCGAAACCTCAGTCAAAAAACACATTGGCGGATCAAAACCTCCCTAGCCATCAGTCATATGGATGCCAGCAAGATTGATAACATTGTTGCTGACATGCGAAAAGTCTTGGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTCCTGGACAATATAAATCCTGAAAATCAAGCTCTTTCGATACTGGTGTCTTGTTTTGTCAAGACCTCACATTGTGAGGAGTATTTGTGTGTTAAGGAAACTATACTTTTAGATCTTCTCAGAGTCATTGGCCATCACCGGGCTCGACTTGCAACACCAGTTCGTACTCTGCAGAAAATATTCTGTGATGATGACTTGGAAAACATACCATATGCAGATTCTGCATGCAGTGGTCCTGGAACAGTTTCTAGACGTCCATTGTTAATGATTGAACCACCTTACAAAACCATGCGAACCAAACATGACACAAAGACAGATGCCAAGGTTGGACCAACAGTTCAAGATTCTAATGTCAGAGAAACTCCTGCGAACTCCAAGTCAGATGACAAAGCTGTGACATCTAACTCCGATGTGAATGGAGTGTCATGTCCTCCATAG 1425 0.407 MIASKLSESDDNEMENHKLPYLRSLPKPDCWRLPLSCNINRPTNALSCKSRAFKCHSFLVPGQLSELPVVKVATTALARSYNVSQSSRVMVKLIPAVGIIIFAIWGVSPLICQTRKLLFQRGDNNWKKSTTKYVVTSYLQPLLLWTGVILICSALELIVLPTENSQVVKERFLNFVRSLSTVLSFAYCLSSVIQQAQKLFIERADASETRNIITNFLSSAMIHATRPFVVNEWIQSSIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHQFTVNIVRNLSQKTHWRIKTSLAISHMDASKIDNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALSILVSCFVKTSHCEEYLCVKETILLDLLRVIGHHRARLATPVRTLQKIFCDDDLENIPYADSACSGPGTVSRRPLLMIEPPYKTMRTKHDTKTDAKVGPTVQDSNVRETPANSKSDDKAVTSNSDVNGVSCPP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2181 474 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 209 465 IPR045042 -
Bisa11g2181 474 SUPERFAMILY Sm-like ribonucleoproteins 211 282 IPR010920 -
Bisa11g2181 474 Gene3D - 228 283 IPR023408 -
Bisa11g2181 474 MobiDBLite consensus disorder prediction 421 474 - -
Bisa11g2181 474 MobiDBLite consensus disorder prediction 438 474 - -
Bisa11g2181 474 Pfam Mechanosensitive ion channel 210 375 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2181 Bisa-ChrBisa11 45484495 45489833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2181 35 468 Mechanosensitive Ion Channel Family AT5G10490 54.959 0.0 541