Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2173 ATGGATGCAACCCAAACAGCGAAAATCTATGTTGCAGTCGGTAATGATATGCAAGATGGAATTAAAACCTTGCATTGGGCTCTCAATAAGTGGAAATCTCATCCCATTTCCTTAGTCATTCTTTATGTGAATCACAACATTTCCAAGGATTATGTTTATACCCCATTTGGGAAACTCCCAGCAAGATCTGTGAGCGATGAGATGCTAGCAGTTCTCAGGAATTCAGAGCAAGAGAAAATCGACAAGCTGTTTTCCAAGTACAAAGCTTTCTGTGGGAAGGTGCCAGCTGAAATCTTTGAAGTTGAGAAATATGACGAGCCTATCCAAAAACGCATCACAGACTTGATATTTGGTCTACAGATAACCAAACTGGTCATGGGATTTTCATTAATGAAGCCAAACTGGAAATCAAGAGGTGCCATTAGCGGATTGTTTTATGTTGATCAACATAAGCCTGACTTCTGTGAACTGTTCATCTTATGTGGAGGGAAACAAGTTTTCCTGAGAGGACAGAACTATGAGAAAATCATGGAGGACGATAATGGGGTCACGTTAGCCAGAACGAGAGAAAGGGGATCTTTCAAAGAATGGTTAGAGAGCATGTTCACTGAAAGAAACATGGATTCCCCGGTTAGTAGGAACTCTCGAGGATCATCAACTTCATCAGCAATTGTGGAATCCCCTGTTTCACAGAACCAGTGGGAATTCTATCTCCAGGAGATTGAAAGTTATTTCCAGGATTTGTTGTCTTCTAACTTGGATGAACAAAGCTTTGAGCTACAAGACAATGACGGCTCGCAGATTAGTCCAATTGAGTCAGACGTCAGAGACCAGAACGATTCCGGCATGAGTGGGGCAGAAAAAATTGAGGTCCTAAAAAGTAAACTCAACGAGGCACACAACACCATCCAATTGAAGAGGAAAGAAGCCAAAGATAATATAGACAGACATGCAAAAGCCGAATGGGCTATTTGTTTATGCAACAGTCAGGCCGAAGAACTAGAAGGAAAAATAAAGAAAGAAATGAGCACAAAGGAAGAATTGGAGAAAGAATTGGAAACAGAAAAAGAGAACATACACGAAATCAGATGCGATGTAGAAGAGAGCAAGAGAAGGTTGAATTCACTGGTGGAGCTTCAAAGCGAGCTCTCAAACAAGCTTCAGATATCCACACACGCAAAGTCACGGGCCGAAATCCAATTAGAGAACACATCAAATGCGAGGTTGGAGATGGTCAGAGAAATAGACGAGCTAAGGAGACAAAGAGACGTGCTCAATCGGAGAATAGAATTTTGTAAAGAAAAGGACGCCATTGGAACGGCCGTGAGGTTGAGCGAACCGAGTTTCAATTTCAGGAAGTACACGACGGACGAGATCAGGTTGGCCACCGATAACTTCTCAGAGCAATTGAGGTTGAAGTCCGGAGGCGATTGGACCAATGTTTATAGAGGAAGAATCAATCATTTCACTGTGGCAATTAAGATTCTCAATTCGACGAATGACTTGTCCCAAGAAGATTTCCAAGCCAAGGTGAGACTTCTTAGTAGTATTCGGCAGCCACATGTGGTTGCCATGGTTGGCTTCTGCTCCGAGCTAAACTGCATAGTTCTGGAATATGTGCATAACGGGAGTTTGCGAGACATGCTATTTCCTAGGAGAAGAAACCGGGTCTTGCGGTGGCATGACCGAATCAGGATAGCCACTGAGGTTTGCTCGGGTTTGGGCTTTCTTCATGCAGCCCAACCCAGGCCCATTATTCATAGCAACCTGACCCCTTCCAGTGTTCTCCTGGATCGTAATCTTGTTGCAAAGATCACGGGTATTGGGCCTAACGAATGCAGCTTGGAATCAGACATAAAGGCCTTGGGTCTTTTAATTCTGTATCTTTTGACGGGAAGGAATTGGGCGGGCCTGGTTGAGGAGGCGATGACCATGGATAAAGAAGCTTTGGGTCGAGTTCTGGATGAGACGGCTGGGCGGTGGCCGTTGGATGTGGCGCAAAGGCTTGCTGGTTTAGCAATGAGGTGCATGGGCACCACCCACTGGCCTGAGCCCAGTGAAGAACTGAGCATAGCAAAGGTGATGGAGGAGCTGAACGAGATCAGACGAGAGGCTGATGGTGTGGTTGCAAGAGGAGGAGAGAGGGCAACGATTGGTGGGGGTGTAGAAAGAGAAGACTCCACCGACGTGCCCAGTATTTTTCTGTGTCCTATACTTCAGGAGGTGATGAAGAACCCACACGTGGCAGCTGATGGGTTTTCGTATGAGCTAGAAGCAATAGAAGAATGGGTGTATTCGGGGCATGACACATCACCTATGACAAACTTGAAGCTGAAGCACATGTTCCTTACTCCTAATCACACCCTTCGTTCCCTAATTCAGGACTGGCAGAGCAAAAGATCAGCTAAACCATCAGCTGCCAACTAA 2427 0.4524 MDATQTAKIYVAVGNDMQDGIKTLHWALNKWKSHPISLVILYVNHNISKDYVYTPFGKLPARSVSDEMLAVLRNSEQEKIDKLFSKYKAFCGKVPAEIFEVEKYDEPIQKRITDLIFGLQITKLVMGFSLMKPNWKSRGAISGLFYVDQHKPDFCELFILCGGKQVFLRGQNYEKIMEDDNGVTLARTRERGSFKEWLESMFTERNMDSPVSRNSRGSSTSSAIVESPVSQNQWEFYLQEIESYFQDLLSSNLDEQSFELQDNDGSQISPIESDVRDQNDSGMSGAEKIEVLKSKLNEAHNTIQLKRKEAKDNIDRHAKAEWAICLCNSQAEELEGKIKKEMSTKEELEKELETEKENIHEIRCDVEESKRRLNSLVELQSELSNKLQISTHAKSRAEIQLENTSNARLEMVREIDELRRQRDVLNRRIEFCKEKDAIGTAVRLSEPSFNFRKYTTDEIRLATDNFSEQLRLKSGGDWTNVYRGRINHFTVAIKILNSTNDLSQEDFQAKVRLLSSIRQPHVVAMVGFCSELNCIVLEYVHNGSLRDMLFPRRRNRVLRWHDRIRIATEVCSGLGFLHAAQPRPIIHSNLTPSSVLLDRNLVAKITGIGPNECSLESDIKALGLLILYLLTGRNWAGLVEEAMTMDKEALGRVLDETAGRWPLDVAQRLAGLAMRCMGTTHWPEPSEELSIAKVMEELNEIRREADGVVARGGERATIGGGVEREDSTDVPSIFLCPILQEVMKNPHVAADGFSYELEAIEEWVYSGHDTSPMTNLKLKHMFLTPNHTLRSLIQDWQSKRSAKPSAAN 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2173 808 CDD RING-Ubox_WDSUB1-like 731 786 - -
Bisa11g2173 808 Pfam Protein tyrosine and serine/threonine kinase 476 609 IPR001245 GO:0004672|GO:0006468
Bisa11g2173 808 Coils Coil 331 386 - -
Bisa11g2173 808 SUPERFAMILY Protein kinase-like (PK-like) 447 678 IPR011009 -
Bisa11g2173 808 SMART Ubox_2 733 796 IPR003613 GO:0004842|GO:0016567
Bisa11g2173 808 Gene3D Transferase(Phosphotransferase) domain 1 547 707 - -
Bisa11g2173 808 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 728 805 IPR013083 -
Bisa11g2173 808 Coils Coil 401 435 - -
Bisa11g2173 808 Coils Coil 289 313 - -
Bisa11g2173 808 SUPERFAMILY RING/U-box 724 802 - -
Bisa11g2173 808 Pfam U-box domain 730 800 IPR003613 GO:0004842|GO:0016567
Bisa11g2173 808 ProSiteProfiles Protein kinase domain profile. 467 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2173 808 MobiDBLite consensus disorder prediction 262 282 - -
Bisa11g2173 808 PANTHER OS02G0152300 PROTEIN 9 795 - -
Bisa11g2173 808 Coils Coil 691 711 - -
Bisa11g2173 808 MobiDBLite consensus disorder prediction 262 280 - -
Bisa11g2173 808 Gene3D Phosphorylase Kinase; domain 1 450 539 - -
Bisa11g2173 808 ProSiteProfiles U-box domain profile. 729 803 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2173 Bisa-ChrBisa11 45429163 45433661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2173 3 806 U-box Gene Family AT5G65500 49.206 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bisa11g2173 PK_Tyr_Ser-Thr 7.8e-21 CL0016