Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2172 ATGGCTCGCCCTCCTAACTGGCTGTCGTTTTCGCTGTCGCCGATGGAGATGCTGACCTCCTCCGACTCTCAGTCACAGTTCGTCCAATACGACAACCCCTCTGTCACTAACACCTCTTCTCACTATCTCGTCGATAACTTGTATGCTAATGGGTGGGCGAATCTCAAGTCACAGGCAGAGTACTACAACGAGGCGGAGCAGAACCAAATTAGAGGAGGAAGCTTGATGATGGCCCCACAGGATCAGAACCATGAGGCGCCGAAGCTGGAGGACTTCCTGGGTTACTCCGATAGCCAGACGGAGACCCAGGATTCGTCACTAACTCAGATATACGACCCTAGCGGCGGCGGGTCAGGCTACTTGGGCGACCCGCAAGATCTGAAAGCATTCGCTGGGTTTCAGTTCCAAGCTTTCTCGGGGAACTCCGGTTCCGAGGTGGACGACTCCGCCTCCGTCGCCAAAACCACTCACGCTGCCGGTGGTGAGTTTGTGATCGAGTCCTCTGGGAATGACGTGGCTCTCTCTGGTTGCGCCACGGGTGCTGCTCTGTCACTGGGGGCCCCGCGGAGTGGCGAGAGAGCCGTAGCCGTGGTGGACTCCGATGGTTCGAAGAAGGTCGCTGATACTTTTGGCCAGCGAACTTCAATTTACAGAGGGGTCACCAGACACCGGTGGACGGGTAGATACGAAGCGCATCTGTGGGATAATAGCTGTAGAAGAGAGGGTCAGGCTAGGAAAGGACGTCAAGGTGGATATGACAAGGAGGACAAGGCCGCAAGAGCTTATGATTTGGCAGCTCTAAAGTATTGGGGTCCCGCTGCGACTACCAACTTTCCTGTATCGAACTATGCAAAGGAATTAGAGGAGATGAAACATGTAACAAAGCAAGAATTCATTGCATCATTGCGAAGGAAAAGTAGCGGTTTTTCCAGGGGAGCTTCTGTATACAGAGGCGTAACAAGGCACCATCAGCAGGGTAGATGGCAAGCAAGAATTGGTCGTGTTGCAGGGAACAAAGATCTTTACCTCGGAACATTTGCGACTGAAGAGGAAGCAGCGGAGGCATACGATATTGCAGCCATCAAATTTAGAGGGGCAAATGCTGTGACGAACTTCGAGATGAATCGCTATGACGTGGAAGCCATTATGAAGAGTTCTCTTCCCGTTGGCGGGTCAGCTAAACGCCCTAAGCATTCCCAAGAACCAGAGCAGAATCATCCTCCCACCACTCATCATCAGCCACATCTCCCATACCCAAACCTCATTCGTAACAGTAGCACCATCAACTTTGCCCCCATTCAGCCTCCTCTTGCCTCCATCCCCTCTGCTATTCCCTTCGACCCTGCCTCTGCCGCCCAACAGCTTTACCCCCACAATCTCTTTCACCACTTTTATACCCCCGCTCCCCCCGCCGGAACTGCCGACCCCCCTCTCTCCGCCGCTGCTTTGCCACCCTTCACTGCGCCCCCCCCGCCACCTCCTGAGTTCTTTCTCTGGCCTCATCAGCCCTGTTGA 1515 0.5413 MARPPNWLSFSLSPMEMLTSSDSQSQFVQYDNPSVTNTSSHYLVDNLYANGWANLKSQAEYYNEAEQNQIRGGSLMMAPQDQNHEAPKLEDFLGYSDSQTETQDSSLTQIYDPSGGGSGYLGDPQDLKAFAGFQFQAFSGNSGSEVDDSASVAKTTHAAGGEFVIESSGNDVALSGCATGAALSLGAPRSGERAVAVVDSDGSKKVADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGPAATTNFPVSNYAKELEEMKHVTKQEFIASLRRKSSGFSRGASVYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIMKSSLPVGGSAKRPKHSQEPEQNHPPTTHHQPHLPYPNLIRNSSTINFAPIQPPLASIPSAIPFDPASAAQQLYPHNLFHHFYTPAPPAGTADPPLSAAALPPFTAPPPPPPEFFLWPHQPC 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2172 504 SUPERFAMILY DNA-binding domain 215 281 IPR016177 GO:0003677
Bisa11g2172 504 SUPERFAMILY DNA-binding domain 314 374 IPR016177 GO:0003677
Bisa11g2172 504 ProSiteProfiles AP2/ERF domain profile. 216 279 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 CDD AP2 314 373 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 80 412 - -
Bisa11g2172 504 Gene3D AP2/ERF domain 216 281 IPR036955 GO:0003700|GO:0006355
Bisa11g2172 504 Gene3D AP2/ERF domain 315 375 IPR036955 GO:0003700|GO:0006355
Bisa11g2172 504 PRINTS Ethylene responsive element binding protein signature 217 228 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 PRINTS Ethylene responsive element binding protein signature 355 375 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 FunFam AP2-like ethylene-responsive transcription factor 314 375 - -
Bisa11g2172 504 ProSiteProfiles AP2/ERF domain profile. 315 373 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 FunFam AP2-like ethylene-responsive transcription factor ANT 215 281 - -
Bisa11g2172 504 SMART rav1_2 216 285 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 SMART rav1_2 315 379 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 CDD AP2 215 281 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 Pfam AP2 domain 314 365 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 Pfam AP2 domain 216 271 IPR001471 GO:0003700|GO:0006355
Bisa11g2172 504 MobiDBLite consensus disorder prediction 388 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2172 Bisa-ChrBisa11 45395625 45401311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2172 82 502 AP2-EREBP Transcription Factor Family AT5G10510 56.693 2.45e-150 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa11g2172 AP2 1.2e-08 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2172 11 45395625 45401311 Bisa01g1506 01 25563329 25567733 CCT