Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2170 ATGGAGTCACCAGTTAAGAAGAGAGGAGGGTTCTCTAGTGACGATGAGCCGTCGCCAAGAGGCGTATTGGAAATCCCGATTTCGGGTACAGAGTCGGACCACAGTGCAAGCAGCAGCAGTAGCCTGAGTTCCCCGGGGAAGCTGTTGGCAGCGGCGGAGAGACAGGGTCAGCAATGGAAGGCAATGATAGAAACACTGAGGAAGAAGTCAGTGCAGAGGATTTCGACGATTCCATTGCTTGTGTCGAGCTACGACATCTCGAGAAGCTTGAGGAAGAGAAGGATTGGACGGTTTCGAAGCGCAGAAGATAGCCTTCAACTGGGAGGGATTCCTACGAAGCCATCTTGGAGGAACTTCGATTACGAAGAGCTTCAAGCTGCTACGGACGACTTCAGTCCTGAGAACCTGATTGGACAAGGAGGTCATGCTGAAGTGTACAAAGGACGCTTACCCGATGGTCAAGTTGTGGCAGTGAAAAGGCTAATGAGTGGTGAAAAAGAAAATGAGGACAAAGCGGGTGATTTCTTGTCAGAGCTTGGGATTATTGCGCACATAAACCACCCAAACGCTGTACGTTTGATTGGGTTCGGGGTCAATAATGGTCTCTACTTCGTCCTGCAATTCGCCCCACGCGGCAGCCTTTCTTCTCTGCTTTTTGGTTCTGAATGCATGGAGTGGAGCTTAAGGTTCAAGGTAGCTCTTGGAGTGGCAAAGGGCTTACAGTACCTCCATCACGATTGTCCAAGACGAATCATTCACAGAGACGTCAAAGCCTCCAACATATTACTAAACCAAAATTACGAAGCTGAGATTTCAGATTTTGGACTCGCAAAGTGGCTCCCAGAAACGTGGGCCCACCATGTTGTCTTCCCAATAGAGGGCACCTTCGGGTATCTGGCTCCAGAATACTTTATGCATGGAATTGCGGACGAGAAGACTGACGTATTCGCATTTGGGGTTTTGCTACTGGAGCTCATCACGGGTCGTCGAGCAGTTGATTCATGTAGCAAGCAAAGTCTTGTCCTCTGGGCAAAACCGCTGCTGGAGGATAACAATGTGAAGGAATTAGTAGACCCCAGATTAGAAGAAGCTTATGATTCCGCTGAAATGAAGCGCGTCATGATTACTGCTTCCTTGTGCGTCCACCACTTAGCCACTGACCGCCCATACATGAAAGAGGTTTTGAAGCTGCTGGAGGGGGAAGCGGGAAATATTGATATTAAGAAGAAATTAGCACCAACCGCAAGGCTCATGTTACATGCCTGTGACCTTGAAGACTATACTTGCTCTAATTACTTGACCGACCTCCATCGTCACAGGCAACTAGTCATGGAGTGA 1338 0.488 MESPVKKRGGFSSDDEPSPRGVLEIPISGTESDHSASSSSSLSSPGKLLAAAERQGQQWKAMIETLRKKSVQRISTIPLLVSSYDISRSLRKRRIGRFRSAEDSLQLGGIPTKPSWRNFDYEELQAATDDFSPENLIGQGGHAEVYKGRLPDGQVVAVKRLMSGEKENEDKAGDFLSELGIIAHINHPNAVRLIGFGVNNGLYFVLQFAPRGSLSSLLFGSECMEWSLRFKVALGVAKGLQYLHHDCPRRIIHRDVKASNILLNQNYEAEISDFGLAKWLPETWAHHVVFPIEGTFGYLAPEYFMHGIADEKTDVFAFGVLLLELITGRRAVDSCSKQSLVLWAKPLLEDNNVKELVDPRLEEAYDSAEMKRVMITASLCVHHLATDRPYMKEVLKLLEGEAGNIDIKKKLAPTARLMLHACDLEDYTCSNYLTDLHRHRQLVME 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2170 445 PANTHER OS08G0249100 PROTEIN 15 412 IPR046958 -
Bisa11g2170 445 ProSitePatterns Protein kinases ATP-binding region signature. 137 159 IPR017441 GO:0005524
Bisa11g2170 445 ProSiteProfiles Protein kinase domain profile. 131 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2170 445 Gene3D Transferase(Phosphotransferase) domain 1 210 412 - -
Bisa11g2170 445 SMART serkin_6 131 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2170 445 Gene3D Phosphorylase Kinase; domain 1 109 206 - -
Bisa11g2170 445 MobiDBLite consensus disorder prediction 1 49 - -
Bisa11g2170 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Bisa11g2170 445 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 107 208 - -
Bisa11g2170 445 Pfam Protein kinase domain 134 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2170 445 Coils Coil 49 69 - -
Bisa11g2170 445 SUPERFAMILY Protein kinase-like (PK-like) 112 398 IPR011009 -
Bisa11g2170 445 MobiDBLite consensus disorder prediction 30 46 - -
Bisa11g2170 445 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 210 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2170 Bisa-ChrBisa11 45388395 45391653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2170 97 444 Trihelix Transcription Factor Family AT1G70460 40.000 2.47e-74 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa11g2170 PK_Tyr_Ser-Thr 4.6e-39 CL0016