Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2159 ATGATACCTTCTTCGCATTCCCACACTCTGGTTGTAGAAAAGTCAGGCCAAGCAACTTCGTCAACTCCAACCTCGTATTCATTGCACGCATTGACGTCACTGAATACGGAAACAGGGGAGAAAGACGTGACATTCAAAGTGCTCTACTGTGGAATATGCCACACCGATCTCCACGTGATCAAGAACGATTGGGGCAATTCCATCTATCCCATTGTACCTGGGCATGAGATTGCCGGTGTAGTGACAGAGGTGGGAAGCAAGGTACAAAAATTCAAAGTTGGAGACAAGGTTGGTGTAGGGTGCATGGTCGGGTCCTGCCGTTCCTGTCAAGGCTGTTCCAACAATCTTGAGAATCACTGTCCAAAATTTATTCTCACATACGGTGCCCCGTATGTTGATGGCACAATCACATATGGAGGTTACTCTGACTTCATGGTTGCAGACGAGCACTTTGTGGTTCGAATTCCAGAGGAATTGCCTCTTGATGCTGCAGGTCCTCTGCTTTGTGCTGGCATCACAGTGTATAGCCCTCTCAGATATTTTGGTCTGGACCAGCCTGGCCTTCATGTGGGTGTGGTTGGTCTGGGTGGCCTCGGTCACATGGCTGTCAAATTTGCCAAAGCTTTTGGGGCTAAGGTCACAGTCATCAGTACTTCTCCTAACAAAAAGAAGGAAGCCATTGAACATCTCGGGGCTGACTCCTTTGTGGTTAGCCGTGAGGAAGATCAGATGCAGACTGCAATGGGTACTTTGGATGGAATCATTGACACAGTTTCTGCAGTGCATCCTCTGGTGCCTTTGTTGGGTCTGTTGAAGTCTAATGGCAAACTTGTATTAGTTGGTGTACCTGAAAAGCCTCTGGAGCTGCCGGTCTTCCCTTTAATTATGGGTAGAAAGACATTAGCTGGAAGTGGGATTGGAGGGATGAAGGAGACACAAGAAATGATTGACTTTGCTGCAAAGCACAATGTGAAACCAGAGATTGAGGTTATTCCTATGGACTATGTCAACACTGCGATGGAGCGCCTCCACAAAGCAGATGTCAAGTATCGTTTTGTGATCGACATTGGGAATACATTGAAGACAAGCTCTTAG 1095 0.4712 MIPSSHSHTLVVEKSGQATSSTPTSYSLHALTSLNTETGEKDVTFKVLYCGICHTDLHVIKNDWGNSIYPIVPGHEIAGVVTEVGSKVQKFKVGDKVGVGCMVGSCRSCQGCSNNLENHCPKFILTYGAPYVDGTITYGGYSDFMVADEHFVVRIPEELPLDAAGPLLCAGITVYSPLRYFGLDQPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFVVSREEDQMQTAMGTLDGIIDTVSAVHPLVPLLGLLKSNGKLVLVGVPEKPLELPVFPLIMGRKTLAGSGIGGMKETQEMIDFAAKHNVKPEIEVIPMDYVNTAMERLHKADVKYRFVIDIGNTLKTSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2159 364 FunFam Uncharacterized protein 20 169 - -
Bisa11g2159 364 Gene3D - 170 326 - -
Bisa11g2159 364 SUPERFAMILY GroES-like 37 187 IPR011032 -
Bisa11g2159 364 FunFam Putative cinnamyl alcohol dehydrogenase 6 327 356 - -
Bisa11g2159 364 CDD CAD1 36 355 IPR047109 GO:0016616
Bisa11g2159 364 MobiDBLite consensus disorder prediction 1 24 - -
Bisa11g2159 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Bisa11g2159 364 PANTHER ALDEHYDE REDUCTASE 24 359 IPR047109 GO:0016616
Bisa11g2159 364 Gene3D - 28 356 - -
Bisa11g2159 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 325 IPR036291 -
Bisa11g2159 364 Pfam Zinc-binding dehydrogenase 197 320 IPR013149 -
Bisa11g2159 364 Pfam Alcohol dehydrogenase GroES-like domain 41 154 IPR013154 -
Bisa11g2159 364 FunFam Cinnamyl alcohol dehydrogenase 170 326 - -
Bisa11g2159 364 SMART PKS_ER_names_mod 24 354 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2159 Bisa-ChrBisa11 45187887 45190964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2159 11 361 Monolignol Biosynthesis Gene Families AT4G37990 68.091 3.57e-163 459