Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2157 ATGAAGCAACTTCGTCAACTCCAACCTCATTCAAACATGGCAGTACAACCACAACCTGAGTTCCAACATCCCAAGAAGGCCTTCGGATGGGCAGCTAGGGATCCATCTGGTGTTCTCGCCCCTTTCAACTTCTCTCGAAGGGAAACCGGGGAGAAAGACGTGACATTCAAAGTGCTCTACTGTGGAATATGCCACTCCGATCTCCACATGGTCAAGAACGAATGGGGCAATTCCGTCTATCCACTTGTACTTGGGCATGAGATTGCCGGTGTAGTGACACAGGTGGGAAGCAAGGTACACAAATTCAAAGTTGGAGACAAGGTTGGTGTAGGGTACATGGTCGGGTCCTGCCGTTCCTGTCAAGGCTGTTCCAACAATCTTGAGAATCACTGCCCAAAATTTATTCTCACATACGGTGCCCCGTATGTTGATGGCACAATCACATATGGAGGTTACTCTGACTCCATGGTTGCGGACGAGCACTTTGTGGTTCGAATTCCAGAGGAATTGCCTCTTGATGCTGCTGGTCCTCTGCTTTGTGCTGGCATCACAGTGTATAGCCCTCTCAGATATTTTGGTCTGGACCAGCCTGGCCTTCATGTGGGTGTGGTTGGTCTGGGTGGCCTTGGCCACATGGCTGTCAAATTTGCCAAAGCTTTTGGGGCTAAGGTCACAGTCATCAGTACTTCTCCTAACAAAAAGAAGGAAGCCATTGAACATCTCGGGGCTGACTCCTTTGTGGTTAGCCGTGAGGAAGATCAGATGCAGACTGCAATGGGTACTTTGGATGGAATCATTGACACAGTTTCTGCAGTGCATCCTCTGGTGCCTTTGTTGGGTCTGTTGAAGTCTAATGGCAAACTTGTATTAGTTGGTGTACCTGAAAAGCCTCTAGAGCTGCCGGTCTTCCCTTTAATTATGGGAAGAAAGATAGTAGCTGGAAGTGGGATTGGAGGGATGAAGGAGACACAAGAAATGATTGACTTTGCTGCAAAGTACAACGTGAAACCAGAGATTGAGGTTATTTCTATGGACTATGTCAACACTGCAATGGAGCGCCTCCGCAAAGCAGATGTCAAGTATCGTTTTGTGATCGACATTGGGAATACATTGAAGACAAGCTCTTAG 1128 0.4778 MKQLRQLQPHSNMAVQPQPEFQHPKKAFGWAARDPSGVLAPFNFSRRETGEKDVTFKVLYCGICHSDLHMVKNEWGNSVYPLVLGHEIAGVVTQVGSKVHKFKVGDKVGVGYMVGSCRSCQGCSNNLENHCPKFILTYGAPYVDGTITYGGYSDSMVADEHFVVRIPEELPLDAAGPLLCAGITVYSPLRYFGLDQPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFVVSREEDQMQTAMGTLDGIIDTVSAVHPLVPLLGLLKSNGKLVLVGVPEKPLELPVFPLIMGRKIVAGSGIGGMKETQEMIDFAAKYNVKPEIEVISMDYVNTAMERLRKADVKYRFVIDIGNTLKTSS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2157 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 85 99 IPR002328 GO:0008270|GO:0016491
Bisa11g2157 375 Gene3D - 181 337 - -
Bisa11g2157 375 PANTHER ALDEHYDE REDUCTASE 19 370 IPR047109 GO:0016616
Bisa11g2157 375 FunFam Cinnamyl alcohol dehydrogenase 181 337 - -
Bisa11g2157 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 335 IPR036291 -
Bisa11g2157 375 FunFam Putative cinnamyl alcohol dehydrogenase 6 338 367 - -
Bisa11g2157 375 CDD CAD1 28 366 IPR047109 GO:0016616
Bisa11g2157 375 Pfam Zinc-binding dehydrogenase 208 331 IPR013149 -
Bisa11g2157 375 Pfam Alcohol dehydrogenase GroES-like domain 52 165 IPR013154 -
Bisa11g2157 375 SUPERFAMILY GroES-like 33 198 IPR011032 -
Bisa11g2157 375 SMART PKS_ER_names_mod 37 365 IPR020843 GO:0016491
Bisa11g2157 375 Gene3D - 30 367 - -
Bisa11g2157 375 FunFam Uncharacterized protein 30 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2157 Bisa-ChrBisa11 45166506 45168186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2157 25 372 Monolignol Biosynthesis Gene Families AT4G37990 72.989 7.56e-175 489