Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2139 ATGGAGCTCACTCAACTTGGTTTTCTGGAGGAACTTCTAGCTCCAAGAAGAGACACTTGGAACGCTTTTTCCTCTGGCTTGAGCGACATATTCCCCAATAATGCTTGGAGCTTTGACTCTTTTGAAGATAACCCACCTCTTCCTCTCTCGAATCCCCCATTTGCTTCGTTTTCCACACCATTAGATCAGAGATTTGAATGCCCCTACACCGATGAAGCAGCAGCATACCCATTTGTCGATGGGTTCGCAGTACCAGAGCTGGACTCATCATACACCTCAGCACCATTTCCAGCACAAGAGAGTAAGCCATCAATGGAGGATGACGAGTTTGGCTTTCTGGGCAGTGAAAGTCAGAGTCTTGAAGAAACAAACAATGGCTGCAAAATTGAGGAACAAGTTACAGAAGTCCCGGTCTTCAACATGGGTTTGTGTGGGGAGAAAAAACCCAAGTCCAAAAAGCTGGAAGGGCAGCCCTCTAAGAATCTCATGGCAGAAAGAAGGCGAAGAAAGCGCCTCAATGATCGCCTTTCCATGCTAAGGTCAATAGTTCCTAAGATCAGCAAGATGGACAGGACCTCTATTCTTGGAGACACCATAGATTACATGAAAGAGCTTCTAGAAAGAATCGGTAAGTTGCAAGAAGAGAGAACAGAAGAAGAGAGCACAAATCAGATTAACCTCTTGGGGAATTCCAAGGAGACAAAGCCAAATGAAGTGATGGTAAGAAATTCCCCCAAGTTTGATGTGGAGAGGAGAGACCAGGACACAAAAATCAGTATCTGCTGTGCCACAAGGGCTGGATTGTTACTGTCAACAGTGAACACCCTTGAAGCATTAGGCCTTGAGATTCAGCAATGTGTTATAAGCGGCTTCAATGATTTTTCAATGCAAGCATCTTGCTCAGAGGTGGCTGAGCAGAGAACTCGTATTAGCTGTGAGGAGATCAAGCAAGCACTTTTCAGAAATGCTGGTTATGGTGGGAGATGTCTATAG 993 0.4522 MELTQLGFLEELLAPRRDTWNAFSSGLSDIFPNNAWSFDSFEDNPPLPLSNPPFASFSTPLDQRFECPYTDEAAAYPFVDGFAVPELDSSYTSAPFPAQESKPSMEDDEFGFLGSESQSLEETNNGCKIEEQVTEVPVFNMGLCGEKKPKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEERTEEESTNQINLLGNSKETKPNEVMVRNSPKFDVERRDQDTKISICCATRAGLLLSTVNTLEALGLEIQQCVISGFNDFSMQASCSEVAEQRTRISCEEIKQALFRNAGYGGRCL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2139 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 219 IPR036638 GO:0046983
Bisa11g2139 330 Coils Coil 202 222 - -
Bisa11g2139 330 SMART finulus 162 211 IPR011598 GO:0046983
Bisa11g2139 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Bisa11g2139 330 Pfam Helix-loop-helix DNA-binding domain 162 205 IPR011598 GO:0046983
Bisa11g2139 330 Gene3D - 148 223 IPR036638 GO:0046983
Bisa11g2139 330 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 70 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2139 Bisa-ChrBisa11 44788864 44790172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2139 58 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 52.381 1.83e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g2139 HLH 6.9e-10 No_clan