Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2121 ATGGCTTCCGACAGCTTCGTCGACAAAAATGCTGTTTTCAGAAAGCTCAGGGCAAAGTCCGATAATAAGATGTGTTTCGATTGTAATGCAAAGAATCCAACTTGGGCGTCCGTTACATATGGGATCTTCCTCTGCATCGATTGCTCGGCAGTTCATCGCAGCCTTGGTGTGCACGTCAGCTTTGTGAGATCTACGAATTTAGACTCATGGACTCCTGAGCAACTGAGAACGATGAGCTTTGGAGGAAACAATCGTGCACATGTTTTCTTTAAGCAACATGGTTGGACTGATGGCGGAAAAATAGAGGCCAAGTACACGTCTAGAGCAGCAGAGCTGTATAGACAAATTCTTTCTAAGGAAGTAGCTAAAAGTATGGCAGAGGAGGCAGGTTTACCGACATCACCTGTTACTTCTCAGTCTGCACCAGTGACTAATGGACTTCCTGAAGTAAGGACCAATGAATTATCAAAAGAAAACATTTTGGAAAAGCCAGAATCACCTGAGAGTACTGTTTCACCTAAAGCTTCTCATACAACAGTTTCCAGTACTGTCAAGAAACCTATTGGTGCCAAAAAACCCGGCAAGACTGGTGGCCTTGGTGCCCGGAAGCTTACTAAAAAGCCAAGTGAGTCTCTATATGAGCAGAAGCCAGAAGAAGCACCTGCTCCAGTGTCTTCCTCAACAAGCAACGCTTTGGCAGCTGGGCCACCCTTGACATCTCGGTTTGAGTATGTAGAAAATGTCCATTCATCTGAGTTGAATTCTGGAGGTGCACATGTACTTAGTCATGTGTCTGCGCCAAAGTCATCGAGCTTTTTCGCAGATTTTGGTATGGATAGTGGATTCCCAAAAAGATCTGGGCCAAATTCCTCAAAAGTTCAAATTCAGGAATCTGATGAAGCAAGAAAGAAGTTCTCAAATGCAAAATCTATATCTTCCGCCCAATTTTTTGGAGATCAGAACAAAGGTGCGGATGTGGACAGTCAAGTTACTTTGTCACAATTCTCGGGTTCGACTGCTATCTCCAGTGCGGATCTTTTTGGTCACAAAGCTGATTCCTCCATTGATCTTGCTGCAAGTGATCTTATCAACCGACTATCTTTCCAGGCACAACAAGATATCTCTTCTATAAGAAACATTGCAGGCGAGACTGGAAAGAAGCTGAGTTCCTTGGCGTCCAATTTGATGTCAGATCTTCAGGACAGAATCCTCTAA 1215 0.4403 MASDSFVDKNAVFRKLRAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVSFVRSTNLDSWTPEQLRTMSFGGNNRAHVFFKQHGWTDGGKIEAKYTSRAAELYRQILSKEVAKSMAEEAGLPTSPVTSQSAPVTNGLPEVRTNELSKENILEKPESPESTVSPKASHTTVSSTVKKPIGAKKPGKTGGLGARKLTKKPSESLYEQKPEEAPAPVSSSTSNALAAGPPLTSRFEYVENVHSSELNSGGAHVLSHVSAPKSSSFFADFGMDSGFPKRSGPNSSKVQIQESDEARKKFSNAKSISSAQFFGDQNKGADVDSQVTLSQFSGSTAISSADLFGHKADSSIDLAASDLINRLSFQAQQDISSIRNIAGETGKKLSSLASNLMSDLQDRIL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2121 404 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Bisa11g2121 404 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Bisa11g2121 404 CDD ArfGap_ArfGap2_3_like 8 123 - -
Bisa11g2121 404 MobiDBLite consensus disorder prediction 128 233 - -
Bisa11g2121 404 Gene3D Arf GTPase activating protein 2 138 IPR038508 -
Bisa11g2121 404 Pfam Putative GTPase activating protein for Arf 12 106 IPR001164 GO:0005096
Bisa11g2121 404 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Bisa11g2121 404 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Bisa11g2121 404 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Bisa11g2121 404 MobiDBLite consensus disorder prediction 283 304 - -
Bisa11g2121 404 MobiDBLite consensus disorder prediction 165 185 - -
Bisa11g2121 404 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 1 137 - -
Bisa11g2121 404 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 5 404 - -
Bisa11g2121 404 MobiDBLite consensus disorder prediction 131 152 - -
Bisa11g2121 404 SUPERFAMILY ArfGap/RecO-like zinc finger 11 125 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2121 Bisa-ChrBisa11 44433496 44439249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2121 13 91 C2H2 Transcription Factor Family AT4G21160 45.000 8.72e-20 87.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2121 11 44433496 44439249 Bisa11g2121 11 44433496 44439249 ECH