Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2109 ATGGCTCTGCTTGAAACTCTTTCGTCCACTGAGCTTTTCAACTTCATCATCTATGACACTATCTTTGCAACCCCATTTCCCAACCATGACTCCTCCTCAGAAGCTACTTTCTTAGTAGAGAACAGAGTTAAGCCTCAGGAACATGACCCTGCATCATTCAATGATCAGTCTTCTTCCCGAAAACGCCATTCTGATGAGCCTCAAGTACTGGGGAGGAAGAAGAGAAGAAGGAAGCCGAGGGTTTGCAAGAACAAGGAAGAAGCTGAGACTCAGAGAATGACCCACATTGCTGTTGAAAGAAACCGCCGGAAGCAGATGAATGAGCATCTTGCTGTTCTGCGTTCACTCATGCCTGAATCCTACGTCCAAAGGGGTGATCAGGCCTCTATCGTGGGTGGTGCTATAGATTTTGTGAAGGAGCTTGAGCATCTGTTGCAGTCACTTGAAGCTAAGAAGTTGCAGCTTCTGCAACAAGAAGTGGCACAATCTAATGAAGACTCCAACATTTTCAAACTCATGAGACCCCCTTTTGCACAATTCTTTGTGTATCCTCAGTACACATGGTCCCAGGCTCCTAACAAATACACATCAAAGACCAAGGCTTCCATAGCTGATATAGAGGTCACTTTGATAGAGACACATGCAAATCTTAGAATTCTCTCACGCAAAAGCCCCAGGAAGTTGTCAAAGTTGGTTGCTGGTTTTCAAACACTCTATCTCACCATTTTACATCTCAATGTCACCACCATAGACCCTTTGGTGCTCTACTCTATCAGTGCCAAGGTTGAAGAAGGATGCCAACTTGGTTCAGCAGAGGACATAGCAACAGCAGTTGACCACTTGCTCAGAAGCATTGAGGAAGAAGCTTCCCTTTGCTTTGATGTGTCAAAAGCTTAG 897 0.4504 MALLETLSSTELFNFIIYDTIFATPFPNHDSSSEATFLVENRVKPQEHDPASFNDQSSSRKRHSDEPQVLGRKKRRRKPRVCKNKEEAETQRMTHIAVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIDFVKELEHLLQSLEAKKLQLLQQEVAQSNEDSNIFKLMRPPFAQFFVYPQYTWSQAPNKYTSKTKASIADIEVTLIETHANLRILSRKSPRKLSKLVAGFQTLYLTILHLNVTTIDPLVLYSISAKVEEGCQLGSAEDIATAVDHLLRSIEEEASLCFDVSKA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2109 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 90 141 IPR011598 GO:0046983
Bisa11g2109 298 Gene3D - 82 159 IPR036638 GO:0046983
Bisa11g2109 298 SMART finulus 96 147 IPR011598 GO:0046983
Bisa11g2109 298 CDD bHLH_AtFAMA_like 93 152 - -
Bisa11g2109 298 PANTHER MAX DIMERIZATION, MAD 44 290 - -
Bisa11g2109 298 MobiDBLite consensus disorder prediction 44 72 - -
Bisa11g2109 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 89 158 IPR036638 GO:0046983
Bisa11g2109 298 MobiDBLite consensus disorder prediction 44 91 - -
Bisa11g2109 298 Coils Coil 138 158 - -
Bisa11g2109 298 Pfam Helix-loop-helix DNA-binding domain 91 142 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2109 Bisa-ChrBisa11 44331055 44332689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2109 82 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 58.242 1.00e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g2109 HLH 1.5e-10 No_clan