Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2096 ATGGGAAGGGCACCATGTTGTGACGAGAATAGTGGAGTACTGAAGAAAGGGCCATGGACGCCTGACGAAGATGAGAAGCTTAAGGAACACATCATGAAGCATGGGCATGGAAGTTGGAGAACACTTCCAAAGCATGCAGGTCTTAATAGGTGTGGCAAGAGCTGCAGGTGGTCAAAGATTGCCTCCCATCTTCCGGGAAGAACAGATAATGAAATAAAGAACTTCTGGAACACCCACATAAGAAAGAAACTGCTTCATATGGGTATTGACCCAGAAACTCACAAGCCCAGGACCGACCTCAATCCCCTCATCAATCTGGCTCCCTTGCTTGCCACCATGTCATCAAACATGAGTCCATGGGGGAACAATAATCCTCTTCCTTCTCACTCACAACTTGATATCACCACTCGACTATCCAGAATCCAATTACTGCAAAACCTCCTGCAAGTTCTTAACGCAAACCCTTTCCTCTTACCCAATAATCAGGCTCACAATAATCACACCCTCCTCAATAACCCACTTATTCAACAGCTTGAAGCCCTCAACACCATCTACAACAACAACAACAACAACAACAACAGTGATAATGGGCAGCCTTTGATGTTGGGAGGTCAAGAATATGCAAACCCATACCACGTGCCAAAATCATGCACAGATAATGGAGAAGGAGGATCTGGTTCTGGTTCTGGTGGGTTTGGTTTCAATAATGATAATAATAATTATAATACTTCATATTATCAGATTCAGAACCAGTCAGAGATGGTACTTCCTGCATTAGTCTTGGCCTCTCCGGCCACCAACGGCGGCGGCGCTCTCAACCAGATCGACGGTAGCTGTATTACAGGTCAAGTGTCAACCAATCAGTCGCCTGATTCCTCCACAATCTTCGAGCCTTGGGAGAAGCTTCTCGATGACGAAGCAAGTGGCTCCGACTGGAAAGAGATTCTAGAGTACGTTCTGTTTCTAGTTCATTTTCTTCCTCTTTCCTTCTGTTTTGATGGCCAGAAAATGAAGGAAAAGCAAGAGAGAAAATGA 1035 0.4512 MGRAPCCDENSGVLKKGPWTPDEDEKLKEHIMKHGHGSWRTLPKHAGLNRCGKSCRWSKIASHLPGRTDNEIKNFWNTHIRKKLLHMGIDPETHKPRTDLNPLINLAPLLATMSSNMSPWGNNNPLPSHSQLDITTRLSRIQLLQNLLQVLNANPFLLPNNQAHNNHTLLNNPLIQQLEALNTIYNNNNNNNNSDNGQPLMLGGQEYANPYHVPKSCTDNGEGGSGSGSGGFGFNNDNNNYNTSYYQIQNQSEMVLPALVLASPATNGGGALNQIDGSCITGQVSTNQSPDSSTIFEPWEKLLDDEASGSDWKEILEYVLFLVHFLPLSFCFDGQKMKEKQERK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2096 344 Pfam Myb-like DNA-binding domain 16 56 IPR001005 -
Bisa11g2096 344 SUPERFAMILY Homeodomain-like 16 81 IPR009057 -
Bisa11g2096 344 CDD SANT 18 80 IPR001005 -
Bisa11g2096 344 MobiDBLite consensus disorder prediction 1 20 - -
Bisa11g2096 344 MobiDBLite consensus disorder prediction 212 231 - -
Bisa11g2096 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 84 IPR017930 -
Bisa11g2096 344 SMART sant 15 82 IPR001005 -
Bisa11g2096 344 Gene3D - 13 56 - -
Bisa11g2096 344 Gene3D - 57 85 - -
Bisa11g2096 344 ProSiteProfiles Myb-like domain profile. 11 80 IPR001005 -
Bisa11g2096 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2096 Bisa-ChrBisa11 44152644 44155149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2096 1 317 MYB Transcription Factor Family AT5G16770 39.394 5.28e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa11g2096 Myb_DNA-binding 1.4e-11 CL0123