Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2095 ATGTCAGGCCGGAGCACATTCTCCGGCGACTCACCGGCCGTGGATGCAAAGGAGGGAAATAAGGAGAAAAAGGAGAGGAAAGTTCCTCTGTTGAAGCTGTTCTCTTTTGCTGATTCTTATGATTATGTACTAATGGCCTTTGGATCCACTGGTGCATGTGTTCATGGAGCTTCTGTGCCTGTCTTCTTCATCTTCTTTGGAAAGTTGATAAATGTCATAGGCTTGGCTTATCTTTTTCCCAAAGAAGCTTCTCACAAAGTTGCCAAGTATTCGTTGGATTTTGTGTATCTGAGTATAGCAATTTTGTTTTCATCTTGGATAGAGGTGGCATGTTGGATGCACACTGGGGAGCGTCAAACAGCGAAGATGAGAATGGCTTATCTGAGGTCAATGTTGAACCAAGACATTAGTCTCTTTGACACTGAAGCATCAACTGGAGAGGTCATTTCTGCCATTTCCAGCGAAATCCTCGTCGTTCAAGATGCTCTCTCTGAGAAGGTGGGAAATTTCTTGCACTACATAAGCCGATTCATAGCGGGATTTACTATTGGATTTCTGAGAGTATGGCAGATAAGCTTAGTGACACTTGCGATCGTTCCCTTGATTGCTCTCGCTGGAGGTCTCTATGCTTACGTGACAATAGGGCTTATTGCCAAGGTTCGAAAAGCTTATGTTAGGGCTGGTGAAATCGCCGAAGAGGTGATAGGGAATGTTCGAATAGTGCAAGCATTTGCAGGGGAAGAAAGAGCAGTGAGATTATACAAAGCAGCTCTCACGAATACTTACAAAAATGGTCGAAAAGCAGGTTTAGCAAAGGGTCTGGGACTAGGCTCTATGCATTGTGTCCTGTTTCTGTCATGGGCCCTGCTAGTTTGGTTCACCAGTGTAGTTGTTCACAAGAACATCGCCAATGGAGGCGAGTCTTTCACTACCATGCTCAATGTTGTTATCTCTGGCCTCTCACTTGGGCAGGCTGCACCAGATATCACTGCATTTATCCGAGCTAAGGCAGCGGCCTATCTGATTTTTGAGATGATAGAAAGGGAAACAGTGAGCAGAATCAACTCAAAAACTGGCCACAAATTAAGCAAATTGGATGGTCACATCCAATTTAAAGATGTCTGTTTCAGTTATCCATCTCGTCCTGATATAGTTATTTTCGACAAACTCTGTCTTGACATTCCTCCAGGCAAAATTATAGCCCTAGTGGGAGGAAGCGGGTCTGGAAAGAGTACTGTTATATCATTGATTGAGCGCTTCTATGAACCTCTTTCTGGGCAGATACTATTAGACCGTAATGATATCCGAGAACTTGATCTCAAATGGCTAAGAAGGCAAATTGGGCTAGTTAATCAAGAACCTGCCCTTTTTACCACAACCATTCGAGAAAACATACTCTATGGAAAAGATGATGCCACTCTTGAAGAACTTAAACACGCTGTGAAGCTTTCAGATGCTCAGTCTTTCATTGACAATCTTCCTAATAAATTAGAAACTCAGGTTGGTGAGAGAGGGATACAACTATCAGGTGGACAAAAGCAAAGGATTGCAATATCTCGAGCTATTGTGAAGAACCCATCAGTCCTGTTGTTGGATGAAGCTACTAGTGCTCTGGATGCAGAGTCTGAGAAGAATGTACAAGAAGCTCTTGATCATGTCATGGTTGGTAGAACAACTGTCATTGTGGCACACAGGCTTTCTACAATTAGGAATGCAGATATGATAGCTGTTGTTCGGGGGGGGAAAATTGTGGAAACTGGTAATCATGAGGAGCTAATGTCTAACCCTAATAGTGTATACACATCTCTAGTTCGACTCCAGGAGACAAATTCTTTGCAAAGCCACCCACCAATGGGTTCTACCCATAGCTTGGCACGGATGCCAAGCATAAGGTACTCAAGAGAATTATCCCATTCAACAAAAAGCTTTGGCAGTAGTTTTCGGTCAGATAAAGAATCTTTAGGCCGTGTTTGTGCTGATGAAGTGGAAAGTGCGTCCAAGCCAAGTCATGTTTCTGTAAGAAAACTCTATTCGATGGTTGGCCCTGACTGGTATTATGGGGTTTTTGGCACCTTTTGTGCATTTATTGCGGGAGCCCAGATGCCACTTTTTGCTCTCGGAATCTCTCATGCTCTTGTGTCATATTATATGGACTGGGATACAACATGTCATGAAGTCAAAAAAATCGCGTTTCTCTTCTGTGGGGCAGCAATTGTGACTGTCGTTGTCCATGCCATCGAGCATCTTTCTTTTGGAATCATGGGAGAGAGACTTACTCTTCGTGTGCGAGAAATGATGTTTTCTGCTATTTTGAGGAATGAAATTGGCTGGTTTGATGATACAAACAACACAAGTTCTGCGCTATCATCACGTTTAGAGACAGATGCAACTTTGTTACGAACTGTAATCGTTGATCGGTCTACAATTCTCCTACAGAATGTTGGTCTGGTTGTTGCCTCATTTATTATTGCCTTCATCTTGAACTGGAGGATAACACTGGTTGTCCTAGCTACATACCCTCTGATCATTAGCGGTCACATCAGTGAGAAACTTTTCATGAAAGGCTATGGCGGCAACTTGAGCACAGCATATCTAAAAGCCAACATGCTGGCTGGGGAAGCTGTGAGCAACATACGTACTGTTGCTGCATTTTGTTCTGAAGAAAAGGTGCTAGAACTTTATGCTAATCAGCTTGTTGAGCCTTCCAAGCTTTCATTTAAACGGGGCCAAATTGCTGGAATCTTCTATGGCGTTTCCCAGTTTTTCATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGTTCTGTTTTGATGGGAAAGGAGCTCTCTAGCTTCAAATCAGTCATGAAGTCATTTATGGTTCTAATTGTAGCAGCATTGGCCATGGGGGAGACTTTGGCATTGGCTCCAGACCTTTTGAAAGGGAACCAAATGGTTGCATCAGTTTTTGAAGTGATGGACAGAAAGTCAGGAATAATCGGTGATGCCGGAGAAGAGCTAAAAACGGTGGAGGGAACAATAGAACTAAAAAATATCCATTTCAGCTACCCTTCAAGGCCAAATGTAGTGATTTTTAAAGATTTTAATCTAAGAGTTCCTTCAGGCAAGAGTATTGCTTTGGTGGGGCAAAGTGGTTCTGGTAAAAGCTCTGTCATCTCCCTCATACTCAGATTTTATGATCCAACATCTGGGAGAGTGATGATTGATGGAAAAGACACTAGGAGACTGAATTTGAAATCTCTTAGGAAACATATCGGTCTTGTTCAACAAGAACCAGCACTTTTTGCAACGTCCATTTTTGAGAACATTCTATATGGAAGGGAAGGAGCCTCTGGTTCAGAGGTAATCGAAGCAGCTAAGCTTGCCAATGCTCATAGTTTCATCAGTGCTCTCCCGGAGGGCTACACCACCAAAGTGGGTGAGCGAGGTGTTCAACTATCCGGTGGCCAGAGACAAAGGGTAGCCATAGCCAGAGCAGTCCTAAAGAACCCAGAAATGTTGCTTCTAGATGAAGCCACGAGTGCACTGGACGTAGAATCAGAGCGCTTGGTGCAGCTAGCTTTGGACCGATTGATGCAGAACAGGACAACAGTTATGGTGGCCCACAGGCTATCCACTATAAGAAATGCAGATCAAATATCAGTTTTGCAGAATGGGAAGATAATAGAGCAGGGGACTCATTCAAGTCTTATAGAGAACCGAAATGGAGCGTATTTTAAATTAGTCAACCTTCAACAACACTAG 3744 0.4327 MSGRSTFSGDSPAVDAKEGNKEKKERKVPLLKLFSFADSYDYVLMAFGSTGACVHGASVPVFFIFFGKLINVIGLAYLFPKEASHKVAKYSLDFVYLSIAILFSSWIEVACWMHTGERQTAKMRMAYLRSMLNQDISLFDTEASTGEVISAISSEILVVQDALSEKVGNFLHYISRFIAGFTIGFLRVWQISLVTLAIVPLIALAGGLYAYVTIGLIAKVRKAYVRAGEIAEEVIGNVRIVQAFAGEERAVRLYKAALTNTYKNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSVVVHKNIANGGESFTTMLNVVISGLSLGQAAPDITAFIRAKAAAYLIFEMIERETVSRINSKTGHKLSKLDGHIQFKDVCFSYPSRPDIVIFDKLCLDIPPGKIIALVGGSGSGKSTVISLIERFYEPLSGQILLDRNDIRELDLKWLRRQIGLVNQEPALFTTTIRENILYGKDDATLEELKHAVKLSDAQSFIDNLPNKLETQVGERGIQLSGGQKQRIAISRAIVKNPSVLLLDEATSALDAESEKNVQEALDHVMVGRTTVIVAHRLSTIRNADMIAVVRGGKIVETGNHEELMSNPNSVYTSLVRLQETNSLQSHPPMGSTHSLARMPSIRYSRELSHSTKSFGSSFRSDKESLGRVCADEVESASKPSHVSVRKLYSMVGPDWYYGVFGTFCAFIAGAQMPLFALGISHALVSYYMDWDTTCHEVKKIAFLFCGAAIVTVVVHAIEHLSFGIMGERLTLRVREMMFSAILRNEIGWFDDTNNTSSALSSRLETDATLLRTVIVDRSTILLQNVGLVVASFIIAFILNWRITLVVLATYPLIISGHISEKLFMKGYGGNLSTAYLKANMLAGEAVSNIRTVAAFCSEEKVLELYANQLVEPSKLSFKRGQIAGIFYGVSQFFIFSSYGLALWYGSVLMGKELSSFKSVMKSFMVLIVAALAMGETLALAPDLLKGNQMVASVFEVMDRKSGIIGDAGEELKTVEGTIELKNIHFSYPSRPNVVIFKDFNLRVPSGKSIALVGQSGSGKSSVISLILRFYDPTSGRVMIDGKDTRRLNLKSLRKHIGLVQQEPALFATSIFENILYGREGASGSEVIEAAKLANAHSFISALPEGYTTKVGERGVQLSGGQRQRVAIARAVLKNPEMLLLDEATSALDVESERLVQLALDRLMQNRTTVMVAHRLSTIRNADQISVLQNGKIIEQGTHSSLIENRNGAYFKLVNLQQH 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2095 1247 ProSitePatterns ABC transporters family signature. 1146 1160 IPR017871 GO:0005524|GO:0016887
Bisa11g2095 1247 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524|GO:0016887
Bisa11g2095 1247 CDD ABC_MTABC3_MDL1_MDL2 369 607 - -
Bisa11g2095 1247 PANTHER ABC TRANSPORTER B FAMILY 14 610 IPR039421 -
Bisa11g2095 1247 Gene3D ABC transporter type 1, transmembrane domain 32 976 IPR036640 GO:0005524|GO:0016020
Bisa11g2095 1247 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 688 974 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa11g2095 1247 FunFam ABC transporter B family member 4 359 614 - -
Bisa11g2095 1247 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 46 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa11g2095 1247 Gene3D - 997 1247 IPR027417 -
Bisa11g2095 1247 Pfam ABC transporter transmembrane region 52 317 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa11g2095 1247 Pfam ABC transporter transmembrane region 689 959 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa11g2095 1247 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1007 1243 IPR003439 GO:0005524
Bisa11g2095 1247 Pfam ABC transporter 1026 1174 IPR003439 GO:0005524
Bisa11g2095 1247 CDD ABC_MTABC3_MDL1_MDL2 1007 1245 - -
Bisa11g2095 1247 Gene3D - 359 608 IPR027417 -
Bisa11g2095 1247 CDD ABC_6TM_Pgp_ABCB1_D2_like 677 992 - -
Bisa11g2095 1247 MobiDBLite consensus disorder prediction 1 21 - -
Bisa11g2095 1247 FunFam ABC transporter B family member 4 997 1247 - -
Bisa11g2095 1247 Pfam ABC transporter 388 536 IPR003439 GO:0005524
Bisa11g2095 1247 CDD ABC_6TM_Pgp_ABCB1_D1_like 45 342 - -
Bisa11g2095 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1000 1245 IPR027417 -
Bisa11g2095 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 607 IPR027417 -
Bisa11g2095 1247 SMART AAA_5 396 590 IPR003593 GO:0016887
Bisa11g2095 1247 SMART AAA_5 1034 1220 IPR003593 GO:0016887
Bisa11g2095 1247 SUPERFAMILY ABC transporter transmembrane region 674 988 IPR036640 GO:0005524|GO:0016020
Bisa11g2095 1247 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 605 IPR003439 GO:0005524
Bisa11g2095 1247 SUPERFAMILY ABC transporter transmembrane region 24 339 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2095 Bisa-ChrBisa11 44134534 44147246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2095 12 1246 Calmodulin-binding Proteins AT2G36910 49.604 0.0 1202