Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2094 ATGCGAAGGACGAGTGGGAGGTATAGTCCTCGCGTTCAGGAGGAGGAGAATCGCTTAGCTCCCTCAGCTTCTTCGTCGCAAGGTCATGGACCTCCTTTCTACAAGTCCCACCCAAAACCGCGTAATTCCCAACCGAGGCGGAGGAATCAAGGTGAAAATGTCAAATCCCGATTCGTCAGGAAGTCTGAGTTGGGTTCTTCTAATTCTGAGGTGGATCATTCACTTGAAGAACTGAGCATTTGCGATAATGTTGATGTCACACGGGAAATAGACCAAAGGAAAAAGGACGGTTCGGAGTTGAAGACTGAAGTGAGAGATGAGAGGGAGAGAGATGATGTGGCTGATTCAAGCAAGGAAGGGGATAGCATTCAAGGTAGACTGGATAAGTTACTGAGGAATATAGGAGAGCTCGAATTGACGGAGGAGCAGCTGAGTATCAATAACCAATTGCAGGAAGATGAGTTACTTGTATTGGAGTCAATTTATGGAGAGAACGTCTTCAAGCTTGAGAGATGGGAAGATCTCCGATATTTTCAGATACACATTCACATTGAAGTTTTGGATGAAATTGCCATCACTGCTAAGCTGAAGTCTACTAAGGAACGTAAGACCAAAAACGACAATTCAAATGATTTCCTATATTCTTTCAAAGTCCAATATCTTCCACCAATTATTTTGACATGTTTATTACCTAAGTCATACCCAAGCCACCAACCACCTCTTTTTATAATCTCTGTTAAGTGGTTGGACTCCATAAGAATTTCCAGTTTATGCTCAAAGTTGGATTCAATATGGGCTGAGCAGCAAGGGCAGGAAGTTATATACCAGTGGGTAGAATGGCTACATGGTTTTTCTCTTTCTCATCTGGGAGTTGATAGAGAAATTACACTTGGTCCTTATGGCATGAAACATGTTGGAGATGAGCGAGCTGTTTCAGGGGCTGTGTCCTTAGATTTTGATATTCCTTCACTACGAAGTTACAACAATGAGAGAAATCACGAGAACTTCCTTAAAGGATTGCATGAATGTTGTATTTGCTTTAGCGTATATGCAGGTACAGATTTTGCAAGATTGCCATGTCAGCATTTCTTTTGCTTGAAATGCATGCAGACCTTTACTAATATGCATGTAAAAGAAGGCACCATCAGTAATCTTCAATGTCCTGATTCAAAATGCACTGTTATGATTCCACCTGGCCTGTTAAAACGCTTGCTTGGTGATGAAGAGTATGAACGCTGGGAATCCTTGATGTTGGAGAAAACACTTGCATCAATGTCTGATGTTGCTTATTGCCCAAGATGTGAAACACCTTGTATAGAAGATGAAGAAGACCAGCACGCTCAATGCTCTAAATGCTTCTTTAGCTTTTGCACCCTTTGCAGGGAGCGACGCCACGTTGGCGTAGCATGCATGACAGTAGATATGAAGCTTCGTATTTTGCAAGAGCGCCAGAATTCATCTCAATTAAAGGAAGCTCAGAAGCTTAGGGAACGTGAAATGATTAATGAAATGCTCAGTGTCAAAGAAATTCGTCGTGATTCTAAGCTGTGCCCTTCTTGTCAAATGGCTATTTCCCGAACTGAAGGTTGCAATAAAATGGTTTGTGGCAATTGTGGCCAATATTTCTGTTACCGCTGCAACAAAGCAATTGATCAATCTGATCCCTATGGACATTTCAGGGAGGGGTCCTGTGAACTGTTCCCAGAAGAAATGGTAGAGGCTTGGCAAGAACGCATAAACCATCGCCAGGTGGTAGGACAGATGCAAGCTGAACTCTTTTTTCAACGTGGCCAACGATGTCCTAATTGTCGTCAATTTAATGCAAAGATTGGAAACAATAATCACTTGTTTTGCTGGGCATGTCAAAGCCATTATTGCTACTTATGCAAGGAGAGTGTCAGGCGTAGCACGCAGCATTATGGACCCAAGGGCTGCAAACAGCACACCAAGGATTAG 1956 0.4264 MRRTSGRYSPRVQEEENRLAPSASSSQGHGPPFYKSHPKPRNSQPRRRNQGENVKSRFVRKSELGSSNSEVDHSLEELSICDNVDVTREIDQRKKDGSELKTEVRDERERDDVADSSKEGDSIQGRLDKLLRNIGELELTEEQLSINNQLQEDELLVLESIYGENVFKLERWEDLRYFQIHIHIEVLDEIAITAKLKSTKERKTKNDNSNDFLYSFKVQYLPPIILTCLLPKSYPSHQPPLFIISVKWLDSIRISSLCSKLDSIWAEQQGQEVIYQWVEWLHGFSLSHLGVDREITLGPYGMKHVGDERAVSGAVSLDFDIPSLRSYNNERNHENFLKGLHECCICFSVYAGTDFARLPCQHFFCLKCMQTFTNMHVKEGTISNLQCPDSKCTVMIPPGLLKRLLGDEEYERWESLMLEKTLASMSDVAYCPRCETPCIEDEEDQHAQCSKCFFSFCTLCRERRHVGVACMTVDMKLRILQERQNSSQLKEAQKLREREMINEMLSVKEIRRDSKLCPSCQMAISRTEGCNKMVCGNCGQYFCYRCNKAIDQSDPYGHFREGSCELFPEEMVEAWQERINHRQVVGQMQAELFFQRGQRCPNCRQFNAKIGNNNHLFCWACQSHYCYLCKESVRRSTQHYGPKGCKQHTKD 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2094 651 Gene3D Ubiquitin Conjugating Enzyme 140 290 IPR016135 -
Bisa11g2094 651 CDD RING-HC_ITT1-like 337 396 - -
Bisa11g2094 651 Pfam IBR domain, a half RING-finger domain 411 470 IPR002867 GO:0008270
Bisa11g2094 651 Pfam IBR domain, a half RING-finger domain 507 550 IPR002867 GO:0008270
Bisa11g2094 651 ProSiteProfiles TRIAD supradomain profile. 339 569 IPR044066 -
Bisa11g2094 651 ProSiteProfiles Zinc finger RING-type profile. 343 391 IPR001841 -
Bisa11g2094 651 SUPERFAMILY RING/U-box 411 475 - -
Bisa11g2094 651 FunFam RBR-type E3 ubiquitin transferase 338 422 - -
Bisa11g2094 651 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 339 426 IPR013083 -
Bisa11g2094 651 FunFam RBR-type E3 ubiquitin transferase 485 594 - -
Bisa11g2094 651 SMART ring_2 600 629 IPR001841 -
Bisa11g2094 651 SMART ring_2 343 390 IPR001841 -
Bisa11g2094 651 SMART ring_2 517 546 IPR001841 -
Bisa11g2094 651 Coils Coil 127 147 - -
Bisa11g2094 651 MobiDBLite consensus disorder prediction 95 121 - -
Bisa11g2094 651 SMART RWD2001b 153 288 IPR006575 GO:0005515
Bisa11g2094 651 Pfam RWD domain 149 282 IPR006575 GO:0005515
Bisa11g2094 651 FunFam RBR-type E3 ubiquitin transferase 139 290 - -
Bisa11g2094 651 MobiDBLite consensus disorder prediction 1 72 - -
Bisa11g2094 651 SUPERFAMILY RING/U-box 591 649 - -
Bisa11g2094 651 CDD BRcat_RBR_RNF14 422 472 - -
Bisa11g2094 651 SUPERFAMILY UBC-like 147 284 IPR016135 -
Bisa11g2094 651 ProSiteProfiles RWD domain profile. 153 288 IPR006575 GO:0005515
Bisa11g2094 651 ProSitePatterns Zinc finger RING-type signature. 360 369 IPR017907 -
Bisa11g2094 651 MobiDBLite consensus disorder prediction 45 59 - -
Bisa11g2094 651 SMART ibrneu5 411 470 IPR002867 GO:0008270
Bisa11g2094 651 SMART ibrneu5 499 564 IPR002867 GO:0008270
Bisa11g2094 651 PANTHER UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED 57 555 - -
Bisa11g2094 651 SUPERFAMILY RING/U-box 503 560 - -
Bisa11g2094 651 SUPERFAMILY RING/U-box 339 422 - -
Bisa11g2094 651 CDD Rcat_RBR_RNF14 502 567 IPR047548 GO:0008270
Bisa11g2094 651 Gene3D - 485 590 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2094 355 572 ARIADNE family AT3G27710 25.112 1.35e-16 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2094 11 44062186 44073667 Bisa11g2094 11 44062186 44073667 ECH