Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2092 ATGTCTGACATGGATGGAGTGAGCAATAGCAGCGCGGACGGCGGCGACGCCCAGATGGCTGCTCCGGCGCCGGCGCCCATTTCTAATGCAAACGCTCCCCCGCCGTTCCTTAGTAAGACTTATGACATGGTGGATGATCCGTCCTCGGATGCGATCGTGTCTTGGAGCCCAACCAACAATAGCTTCGTGGTTTGGAACCCACCTGAGTTCGCCAGAGACCTCTTGCCTAAGTACTTTAAGCATAATAACTTCTCCAGCTTTGTTAGGCAGCTGAACACTTACGGTTTCAGGAAGGTGGATCCTGATCGCTGGGAATTTGCTAATGAGGGCTTTTTAAGGGGTCAGAAGCACTTGCTTAAGAATATAACGAGACGAAAACCTGCCCATGGTCATAGTCATCAGCAAGCACAGCATTCACATGGGCAGAGTTCATCAGTTGGGGCATGTGTAGAAGTTGGGAAGTTTGGCCTTGAAGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTGCTCATGCAGGAGCTTGTGAGATTGAGGCAGCAGCAACAGGCCACTGATAACCAGCTGCAGACAATGGTTCAGCGTCTTCAGGGAATGGAGCAACGACAACAGCAAATGATGTCATTTCTTGCCAAGGCTGTACAGAGCCCTAGCTTCTTGGCTCAGTTTGTACAACAGCAGAATGAGAGCAATAGGCGCATAACTGAAGCTAACAAAAAGCGGCGGCTTAAGCAGGATGGTATTGATGAATCAGAGCATGCTGGTGCTTCTGATGGACAAATTGTAAAGTATCAACCTCTAATGAATGAAGCAGCAAAAGCAATGCTAAGGCAGATCATGAAATTGGATACTTCTCGGCATGAATCATTAAATAACAACCCGGATAATTACTTGATTGGTGATGGTTCATCATCATCTACTACAATGGATAGCAGTAGCTCTTCAAGCTGGAATTCTGGGGTAACACTTCAGGAGGTCCAACCAACTTCAGTGCAGTCTCCTCACAATCCGGCCGCATCAGGGACTTCAGTGCCCTCAGCTGGTAAATCTGAAATTCAGCCTTCTCAAGCTGCAGCTTCCATCTCTGTTCCTCAGGTAGATGTCCTCATGCCTGATCTTTCTCCAATACCAGAGATAGGGACAGGAAACATGCTTGATATTCCTGAAGAAAATTATGTGGGACCTGAGATAGACAATGTCGATCCCTCTTCATTGGGAATGAACGGGTCGCTGCCCACAGATATTGATGATTTGTTACGCAATCCTTCCTTTTGGGATGATTTTCTTTTGCAAAGTCCATTACCAGAAGATGTTGAGACCAATGCTGCTGATGCAGTGTCCAAGGGGAATGAGGTGCAACCAATGGAAAATGGATGGGACAATGCTGAACACATGAGCCAACTTACGGAGCAGATGGGTCTTCTTTCTTCTGAAGCAAACGGAGTTTGA 1449 0.4707 MSDMDGVSNSSADGGDAQMAAPAPAPISNANAPPPFLSKTYDMVDDPSSDAIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKNITRRKPAHGHSHQQAQHSHGQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPSFLAQFVQQQNESNRRITEANKKRRLKQDGIDESEHAGASDGQIVKYQPLMNEAAKAMLRQIMKLDTSRHESLNNNPDNYLIGDGSSSSTTMDSSSSSSWNSGVTLQEVQPTSVQSPHNPAASGTSVPSAGKSEIQPSQAAASISVPQVDVLMPDLSPIPEIGTGNMLDIPEENYVGPEIDNVDPSSLGMNGSLPTDIDDLLRNPSFWDDFLLQSPLPEDVETNAADAVSKGNEVQPMENGWDNAEHMSQLTEQMGLLSSEANGV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2092 482 ProSitePatterns HSF-type DNA-binding domain signature. 75 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g2092 482 MobiDBLite consensus disorder prediction 1 15 - -
Bisa11g2092 482 MobiDBLite consensus disorder prediction 287 358 - -
Bisa11g2092 482 SUPERFAMILY "Winged helix" DNA-binding domain 31 125 IPR036390 -
Bisa11g2092 482 SMART hsfneu3 32 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g2092 482 FunFam Heat shock transcription factor 1 29 126 - -
Bisa11g2092 482 MobiDBLite consensus disorder prediction 228 261 - -
Bisa11g2092 482 Pfam HSF-type DNA-binding 36 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g2092 482 Gene3D - 28 126 IPR036388 -
Bisa11g2092 482 MobiDBLite consensus disorder prediction 1 33 - -
Bisa11g2092 482 Coils Coil 154 181 - -
Bisa11g2092 482 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 313 IPR027725 -
Bisa11g2092 482 PRINTS Heat shock factor (HSF) domain signature 36 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g2092 482 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g2092 482 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g2092 482 MobiDBLite consensus disorder prediction 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2092 Bisa-ChrBisa11 44022215 44025548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2092 4 479 HSF AT1G32330 54.473 4.97e-172 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa11g2092 HSF_DNA-bind 1.6e-33 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2092 11 44022215 44025548 Bisa11g2092 11 44022215 44025548 ECH