Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2077 ATGGAGCTATTTCCAGCACAGCCAGATTTGTCTCTGCAAATCAGTCCTCCGAACACCAAATTCACATCCACATGGAGAAGCAGCACTGCCAGAGAACGGGAAGATGAAGCAGACCTGGATTTGGGGTTCTGGAAGAGAGCTTTAGAGTCCAGAAACTCACTCTCGCTCTCCTCCTCAATGCCCATACCCAAAACCACACATCATCATAATACTAACTCCTTCGACCTCTCACTCTCCTCCTCCTGTAATACTCCAACCACAACCACAAGGCCTCCTCCTCCTTCTTCTTCTTCAACCTCAGACTACTCTAACATCCCCCACTTACTATTCCAAAGCGGCAACAGTACTAATGCCAACCCCTTGCAGTCCTTTCACTTCTCTCAGACTCAGACTCACACTCACACTCGTACTCAGCCTCATCACCGCCATCATCATCCACTATTCTTGCAGCAGCAGCAGCAAAGCCTGGGCCAAGACCTGGGCTTTCTTAGGCCCATCAGAGGAATCCCACTCTATCAACAAAGCCCTCCAATCAATTATCCTACTAGTATTATTCCCCCACTATTTGGTATGGATGCCAGTAATTGTTCCACCACTACCACTCCTTCGTCTTGTAATAATTCGTCTATAAGCACCACCACAAGTTCAAGCCCTTTCCAGTCTTCTCATCATCATCAAGGTTTGATGAGGTCGAGGTTGTTGTCTCGCTTCCCTGCTAAGCGCAGCATGAGGGCTCCTCGCATGCGTTGGACTACCACCCTGCATGCTCGCTTTGTTCATGCTGTTGAGCTTTTGGGCGGCCATGAAAGGGCGACACCGAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCCCATGTTAAATCTCATTTACAGATGTACCGAACCGTGAAAACCACAGATAAAGCAGCAGCGGCTTCCTCAGGGCAATCAGATGTGTATGATAATGGTTCATCAGGAGACACTTCTGAAGATTTCATGTTTGACATGAACAATTCAAGAAGGTCTGATCTATCTACCAATCAAGCAAGACCAAGTGCTAATCAAGATAGAGAACATCACGGGCTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAGAGGTAGATAATTCTGCTGGAAATGTGACTTCTTTTGAGAAGGAAATGGATCCAAAAAGCCTAAGTTGCGAGAGAGTATCAGATGGAAGTGCATCGTCAGACATCTCAGGGACAAGCCCTAAGAAGCCTAACTTGGATTTGGAGTTTAGCTTAGGGCAGCCACTTTAA 1287 0.4701 MELFPAQPDLSLQISPPNTKFTSTWRSSTAREREDEADLDLGFWKRALESRNSLSLSSSMPIPKTTHHHNTNSFDLSLSSSCNTPTTTTRPPPPSSSSTSDYSNIPHLLFQSGNSTNANPLQSFHFSQTQTHTHTRTQPHHRHHHPLFLQQQQQSLGQDLGFLRPIRGIPLYQQSPPINYPTSIIPPLFGMDASNCSTTTTPSSCNNSSISTTTSSSPFQSSHHHQGLMRSRLLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAAASSGQSDVYDNGSSGDTSEDFMFDMNNSRRSDLSTNQARPSANQDREHHGLWSNSSREAWLHGKPEVDNSAGNVTSFEKEMDPKSLSCERVSDGSASSDISGTSPKKPNLDLEFSLGQPL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2077 428 NCBIfam myb-like DNA-binding domain, SHAQKYF class 246 299 IPR006447 GO:0003677
Bisa11g2077 428 MobiDBLite consensus disorder prediction 372 428 - -
Bisa11g2077 428 FunFam Myb family transcription factor 244 302 - -
Bisa11g2077 428 SUPERFAMILY Homeodomain-like 243 299 IPR009057 -
Bisa11g2077 428 MobiDBLite consensus disorder prediction 202 228 - -
Bisa11g2077 428 MobiDBLite consensus disorder prediction 11 26 - -
Bisa11g2077 428 MobiDBLite consensus disorder prediction 304 360 - -
Bisa11g2077 428 MobiDBLite consensus disorder prediction 398 413 - -
Bisa11g2077 428 Pfam Myb-like DNA-binding domain 247 298 IPR001005 -
Bisa11g2077 428 Gene3D - 245 302 - -
Bisa11g2077 428 MobiDBLite consensus disorder prediction 54 122 - -
Bisa11g2077 428 MobiDBLite consensus disorder prediction 1 33 - -
Bisa11g2077 428 MobiDBLite consensus disorder prediction 304 349 - -
Bisa11g2077 428 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 427 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bisa11g2077 428 MobiDBLite consensus disorder prediction 93 122 - -
Bisa11g2077 428 MobiDBLite consensus disorder prediction 54 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2077 Bisa-ChrBisa11 43822499 43826972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2077 139 427 G2-like Transcription Factor Family AT5G16560 41.212 9.55e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa11g2077 Myb_DNA-binding 2.2e-05 CL0123