LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g2069	ATGGATAAAACCCCAAAAGAGAAGGAGCCAAAGACACCTCCTGCTACATCACAGGAGCAATCTTCGACCCCTGGCACTGGAACAATAAACCCTGATTGGTCCAGCTTTCAGGCATATTCTCCTATACCTCCACATGGGTTCTTAGCATCAAGTCCCCAAGCCCACCCATATGTGTGGGGTGTCCAGCATATTATGCCTCCGTATGGTACCCCACCACATCCCTATGTTGCAATGTATCCCCATGGTGGTATATATGCTCATCCATCTATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGTATTGCAGAGGCTTCAGGAAACACACTTGGTGGCATAGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATTAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAGAATATTGAACTTAGTAAAACACCAGGAACAGCTGCTAATGGAGTTCATTCAAAAAGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAGAATGACTCTCAGTCAAAATCAGAGGGGAGGCAGGATTCTTTAGAAGCCGAACCATCTCAAAATGGCGGTTCAGTGCATGCTCCTCAAAATGGGGGACTTAATACACCACATACTATGGTTAATCAAACTATGGCTATCGTGCCTATCACTGCCACTGGTGCTCCTGGTGGAGTTCCTGGTCCCACGACAAATTTAAATATAGGAATGGATTATTGGGGTGCACCCACTTCTTCCACTATTCCTGCACTCCGTGGAAAGGTTCCTTCTACTGCTGTTGCTGGAGGGATGGTTGCCGCTGGGTCAAGGGAGAGTGTTCAGCCACAACTTTGGCTTCAGGATGAAAGAGAGATGAAGAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAATGTGATGAACTAGCCCAGCGTGCTGAGGCCTTGAAGGAAGAAAATGCTTCTCTCCGATCTGAAGTGAGTCGGATCAGGAGTGAGTATGAGCAGCTGCTCTCTGAAAATGCTGCCCTCAAGGAGAGGCTCGGGGAATTACCTGACAATAATGAACTTAGGTCCAGTCAGAATGATCAACATGTGGATAGTGACACTCATCAATCTGAGCAGACAGAAGCTGTGCAGGGTGGTCATTAG	1215	0.4691	MDKTPKEKEPKTPPATSQEQSSTPGTGTINPDWSSFQAYSPIPPHGFLASSPQAHPYVWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTLGGIEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNIELSKTPGTAANGVHSKSGESASEGTSEGSDANSQNDSQSKSEGRQDSLEAEPSQNGGSVHAPQNGGLNTPHTMVNQTMAIVPITATGAPGGVPGPTTNLNIGMDYWGAPTSSTIPALRGKVPSTAVAGGMVAAGSRESVQPQLWLQDEREMKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEQLLSENAALKERLGELPDNNELRSSQNDQHVDSDTHQSEQTEAVQGGH	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g2069	404	MobiDBLite	consensus disorder prediction	1	37	-	-
	Bisa11g2069	404	Pfam	G-box binding protein MFMR	6	91	IPR012900	-
	Bisa11g2069	404	MobiDBLite	consensus disorder prediction	366	404	-	-
	Bisa11g2069	404	Pfam	bZIP transcription factor	300	362	IPR004827	GO:0003700\|GO:0006355
	Bisa11g2069	404	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	10	397	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Bisa11g2069	404	Gene3D	-	303	357	-	-
	Bisa11g2069	404	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	302	365	IPR004827	GO:0003700\|GO:0006355
	Bisa11g2069	404	SMART	brlzneu	300	364	IPR004827	GO:0003700\|GO:0006355
	Bisa11g2069	404	MobiDBLite	consensus disorder prediction	285	326	-	-
	Bisa11g2069	404	MobiDBLite	consensus disorder prediction	154	193	-	-
	Bisa11g2069	404	Coils	Coil	320	368	-	-
	Bisa11g2069	404	MobiDBLite	consensus disorder prediction	200	223	-	-
	Bisa11g2069	404	Pfam	Disordered region downstream of MFMR	130	267	-	-
	Bisa11g2069	404	MobiDBLite	consensus disorder prediction	154	223	-	-
	Bisa11g2069	404	MobiDBLite	consensus disorder prediction	14	37	-	-
	Bisa11g2069	404	CDD	bZIP_plant_GBF1	305	355	IPR045314	GO:0003700\|GO:0006355
	Bisa11g2069	404	SUPERFAMILY	Leucine zipper domain	303	359	IPR046347	GO:0003700\|GO:0006355
	Bisa11g2069	404	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	307	322	IPR004827	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g2069	Bisa-ChrBisa11	43673348	43680721	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g2069	1	398	bZIP Transcription Factor Family	AT2G35530	63.951	1.15e-170	481

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Bisa11g2069		MFMR_assoc	1.2e-60	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa11g2069	11	43673348	43680721	Bisa11g2069	11	43673348	43680721	ECH