Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2054 ATGGCAGAGTTTGCTGTGAGTTTTCTGCTCCAAAGGCTTGCGCCTATATTTGAAAATGAGGTCAAATTGTTCACAGGGGTTCGAGAAGATTTGGTGCATCGGAAAGAAAGACTGCAGCTTATCATAGCCCTCTTAAGGGATGCAGATGGATTACAAGAGAGTAACGAGGCGCTCAAAATTAGGGTTAAGCAAGTGAGAGATGTTGTTCATGAGACTGAAGATCTTCTTGATGAATTAGAACTTCTTGAGAAACATAATCACACAGATGGCTTCTCTGTTTCTTTCAGAAAGATCTCTTGCTGTATCAGGAACATGAAAGCTCGATATCGAATTGCTTCTGGATTAAGAGACACGGACTGCCGAATGAAGAATATTTTTTCGCATCATAACAGATTCCTCACTAGATATGACACTGCTTCAAATTCCAGTAATCCAGTGGAGGAGGGAGCAATGCCTAATCTGAAAAGGCTCATCATTCAGAGATGTGTATCGTTGAAGCAGGTGCCCTCAGGCATGGAACATTTGACTAAGCTAAAAGCAATTGATTTCTTTGATATGCCTGATGAATTGATCATGGCACTGCGTCCAAATGGAGGTGAAGATTACTGGAGAGTGGAACATGTTCCTGTGGTTTATTCAACGTACTGGAGATCTGGTGGTTGGGATGTCTACTCCCTGGAGACTTTTGGGGAGGAAAAGAGTTCTTCAACTCTCAATGCTGCAATGCAAAGTCGTGAACTTCCCACTCTCTGGAAGATGACCAGCACGGCAAATAAGAAACATCCCCATGAGCCGAGCATATACATTGACTTAACTGAAGCAAAGATCAACATGTTGTTACCTTTTGGTTCCTTGGCCATACTGGAGCATTATATAAGGGGAAAGCATGGATGGGTGTTCTTATTCAGCCATTCGGGTATTATTCCTTTGGCAGAATGCCTAGCTTATGAGCAATTTCCTTTGTACACTAGACCAACAGTTGGGGGCTTGTTGAATGCCACGTTTGGCAATGCAACCGGAATGACTATATCAATTTATGCTTTGAGAGATGGGATGATTCGGGTTGTTCAGCAACCGTTGTTGGGTTCAATTTTGTCAAAGGTGTTTCAAATATTTGGAGATGCCCTTTTTGTTGGTGGTATTGTCCATTACCAAAAGGCTCAAGTTTTCAACAAGGCAGCTGCGGTTGTGAATTTTAGGATGCTGTTGGTGATTGATAAGGGAATATTGTTTCCTGTTGTGCTTCACTTGACATATTCGAAGGTCTACTTTGGAAAATCAGAGCTATCTCTTAGCAGATTCAGTAGTCGTATAATGCTAGTAGCATATGCAAGCTTCCTTTCTTTTCAACTTAAAATTATAGGAAATGCTACCGAGCATGCAAATGTTATCATGTTCACCATGAAGGACAAGCTTGAAAATACAAGTGGAGTTGCTATTGGATCATCTATACATATATTTCTGTTTGTTATTCCTTTCTGTGTGGTCAATTGGCCAACGGGACCAATAACTCCGACGGCTGGCAGCGACAACACCGAGAGACCAGATGGAACTGAGGTTATCGGAGTGGATATCGGGCAAATGAGTTGA 1590 0.4195 MAEFAVSFLLQRLAPIFENEVKLFTGVREDLVHRKERLQLIIALLRDADGLQESNEALKIRVKQVRDVVHETEDLLDELELLEKHNHTDGFSVSFRKISCCIRNMKARYRIASGLRDTDCRMKNIFSHHNRFLTRYDTASNSSNPVEEGAMPNLKRLIIQRCVSLKQVPSGMEHLTKLKAIDFFDMPDELIMALRPNGGEDYWRVEHVPVVYSTYWRSGGWDVYSLETFGEEKSSSTLNAAMQSRELPTLWKMTSTANKKHPHEPSIYIDLTEAKINMLLPFGSLAILEHYIRGKHGWVFLFSHSGIIPLAECLAYEQFPLYTRPTVGGLLNATFGNATGMTISIYALRDGMIRVVQQPLLGSILSKVFQIFGDALFVGGIVHYQKAQVFNKAAAVVNFRMLLVIDKGILFPVVLHLTYSKVYFGKSELSLSRFSSRIMLVAYASFLSFQLKIIGNATEHANVIMFTMKDKLENTSGVAIGSSIHIFLFVIPFCVVNWPTGPITPTAGSDNTERPDGTEVIGVDIGQMS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2054 529 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 453 496 IPR004713 GO:0006812|GO:0008324|GO:0016020
Bisa11g2054 529 Gene3D - 324 512 IPR044880 -
Bisa11g2054 529 Pfam Rx N-terminal domain 5 95 IPR041118 -
Bisa11g2054 529 Coils Coil 48 82 - -
Bisa11g2054 529 Pfam Sodium/calcium exchanger protein 323 451 IPR004837 GO:0016020|GO:0055085
Bisa11g2054 529 CDD RX-CC_like 2 113 IPR038005 -
Bisa11g2054 529 Gene3D - 4 111 - -
Bisa11g2054 529 Gene3D Ribonuclease Inhibitor 112 193 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2054 Bisa-ChrBisa11 43570496 43577690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2054 451 501 Antiporters AT3G13320 63.462 7.03e-13 68.9