Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2037 ATGGCCGAACTCCTATTCTCTCTGTCCCACTCCGAGCAGAACAACAGCAGCAACAACAACAACGACACTGAAATGAGCGTTCCGCTGCCGATGTGGACTGGAGCCCATCCGCCGCCGCCGTCGTTCACGGTGGCACAGTGGCAGGAGCTGGAACACCAAGCGCTCATCTTTAAGTATCTCAAGGCCGGATTGGCCGTTCCGCCCGACCTCCTCGCTCCGATTCGTAGGAGTCTCCAATTGATGTCGGTCCATCATCACCCAGCTCTGGCTTATTGCTCTTATTACGGGAAGAAGATAGACCCAGAGCCTGGAAGGTGCCGGAGGACAGATGGCAAGAAGTGGAGGTGCTCGAGAGATGCACATCCTGACTCTAAGTACTGTGAACGGCACATGATTCGCCGTCGCTACCGTTCAAGAAAGCCTGTGGAATCACAAGCTCCTCCTCCTCCTTCTCAGTCTTCAGACGCAGGTGGTGGGAGCAGAAGCGGTTGTGGAAGCTCGTTCCACAGCCTGCCCTTGCACACAAATGGTACTCGTGAGGGTTTAAGTCTTGGAAACAACGTTTCGCAGCTGCAGATAGAGTCTCTTCCTAGTGACATTAGCAAGAAAGAGTACAGGTTTGGACTGCACTCTGAAGTAGATGAGCATGACTTCTTACAGAAAGACCTGGGAAGTGTGAGGTATCTTGGTTTTGACTCTTCCTCAGACAGCATGTGGTCTCATTTGTCTCAGATTTCCTCAAATCCCGTCTCTGAATCAAGCAATGTTTCTGTCATGACTACGAACTGCTTTCAACTGCGGGCGATGCAAGATGCTGAGACATCAAATACTGATTCTGGAAGGTCCAAGCAACTTGTCTTCAGTGGCCTAGGTTCGGCAGGGTGTTTGAAACAGGACTATCAGTCCCCTCAGACTCTTTTCAGTGACTGGCCATGGAAGAAGGAGTTAAGCTCCCCCGCCTTGGAATATAGACCCAGTAAGGATTCTAACAGCAACCCTGATGTCAATGTTGATTGCTGTGGATCCTTATAA 1032 0.5087 MAELLFSLSHSEQNNSSNNNNDTEMSVPLPMWTGAHPPPPSFTVAQWQELEHQALIFKYLKAGLAVPPDLLAPIRRSLQLMSVHHHPALAYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQAPPPPSQSSDAGGGSRSGCGSSFHSLPLHTNGTREGLSLGNNVSQLQIESLPSDISKKEYRFGLHSEVDEHDFLQKDLGSVRYLGFDSSSDSMWSHLSQISSNPVSESSNVSVMTTNCFQLRAMQDAETSNTDSGRSKQLVFSGLGSAGCLKQDYQSPQTLFSDWPWKKELSSPALEYRPSKDSNSNPDVNVDCCGSL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2037 343 MobiDBLite consensus disorder prediction 323 343 - -
Bisa11g2037 343 MobiDBLite consensus disorder prediction 137 170 - -
Bisa11g2037 343 MobiDBLite consensus disorder prediction 321 343 - -
Bisa11g2037 343 Pfam QLQ 41 75 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa11g2037 343 PANTHER GROWTH-REGULATING FACTOR 5 13 310 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bisa11g2037 343 SMART QLQ_2 40 76 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa11g2037 343 Pfam WRC 101 143 IPR014977 -
Bisa11g2037 343 ProSiteProfiles QLQ domain profile. 41 76 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa11g2037 343 ProSiteProfiles WRC domain profile. 100 144 IPR014977 -
Bisa11g2037 343 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2037 Bisa-ChrBisa11 43368156 43371250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2037 40 143 GRF Transcription Factor Family AT3G13960 59.091 1.78e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bisa11g2037 WRC 1.4e-19 No_clan