Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2031 ATGTGTCTAACTTACGCACCCATCCGGATACTAACAACCACACACCGGACCCAGCCACCACAATATCTTCCTTGCCAAGTGACTAAGACAACCATCACCACCTCTGTGCAGCTTTTTTTCGTCTTTTCCCCCTTGCACGTTCTCCTTTATCTTTGCTCGCATGCTTCATCTATGGTTGTCGATGGTCTTTTGTGTCGTCACTGGTGTGTGCTTCTGCATTCAACTAGCTCTCATGGTTGGGGACTTAACCATTCTGTGTCATCGTCGTTGGCCGAACATGATGGTGATGATGATGGTTTAATTAGTAATAAGGAGGACTATAATGCATTTGGTTGGCAAGAGAGGTATAAGGTGGCTATAGGTATTGCTAAGGCATTAGACTTTCTGCATAATGGCTTTGTAGAGGCTGTGATCCATAAGGATGTAAGATCTTCGAACATCATTCTTTCAGATGATTTTGAGCCTCAGCTCGCGAATTTTGGACTAGCCAGTTGGGGTTCTTCTTCATTCCATGTTACTTGTTATGATGTTACTGGAACCTTTGGAAAAATTTTGTTCAAGCACTTGCATGCACTATACATATCCACCATTACAACACCACCATACAGAACCAGTATGGAGAAAAGCAGGTCTGATCAGGTTGTTCTCTTCATCGACCACCTCAAAGCCGATCCTCCCTCCTTGGAACCTCATCAAAACGACCACACCACCACCACCACCTCTAATCACCATCCCGACAACGTTAAGCCCAAGACATTAACCTCCAGATCAATCAAAACCCTCAACCGCCTCAGCTTCTCCAAACCCAAATCTCGCATCCTCGAACACACCCACCTTCCTCCTCCCTACACCAATAAACTCGCCATCTCCGAAGACACCGACACCGTCCAATCCTCCACCGACGACGAATGGGACAGCCTCGACGACGAAGAAGAATCAGAGCTGGAGGAACAAGACGGTGCAGAACACGGCCTCAAGTCCCGCCAAAAACAAAAGCGCCATCGTCGGAAAATCCCATGGCGGCGCGTGGTGGAGTGGGCCTTGTTCATAATCATACTCGCTGGCCTGGTCTCTTCCATCACCATTTCTTCTATAAAATCCAAGCACCTATGGGGCTTAGAGATCTGGAAATGGTGTCTCATGGTGATGGTCACTTTCAGTGGACGCCTCGTCTCGGGCTGGCTAGTGGCTGTAGCAGTGTTCATCATAGAGCGAAACTTTATGCTCCGAGAGAAAGTCCTATACTTCATCTACGGTCTCCGAAAGAGCATAAGAAACTGCATATGGCTCGCCCTCGTACTATTCTCGTACTGGACAGTCGTCTTCGACAGCGTCCAGAAGAAGAACCACAAGTTCCTGAACAAGGTGTTCCAAGCCCTCGTGGCGATTCTCGTTGGCGCCATAATCTGGTTAGTTAAGATCGTGCTGGTGAAGATGCTGGCGTCATCGTTCCACGTGGCGACCTACTTCGACAGGATGAAGGAGAGCGTGTTCCACCACTACATACTGGACACGCTGTCGGGGCCGCCGATGGAGGAGAACGAGGAGGAGGACACGTGGCAGCGACTGAAGGCGTCGAAGTCGATGCCGTCGAAGTGGAATAAGGGGAAGGCGATGATGAAGGAGACGAAGAAGTGGGAGAAGTTGGGGTCGAGGAGGATAGATATGGAGAAGCTGAGGAAGCTGAGTATGGAGAGCACGGCATCGGCGTGGAGCGTCAAGAGGCTGGTCAATTATGTCAGGTCTTCGGGGCTGTCGACGATCTCGAGGTCTGTCGACGATTTCGGGACCGCCGAGTCGGAGATCAATAGCGAGTGGGAAGCTAGAAGTTGTGCCCAGAGGATCTTCAAGAACGTTGCTAAACCTGGTGCCAAGTATATTGAAGAGGAGGATCTCAGGAGATTTTTGAAGAGGGTTGAGATTCATACCATATTCCCACTCTTTGAAGGTGCCCTTGAAACTGGAAAGATCAGCAGGTCTTCATTTAGAAATTGGGTGATTCGAGCATATTATGAAAGAAAAGCTCTGGCACAATCGCTGAACGATACGAAAACAGCAGTGCAACAGCTTCACAAACTAGCAAGCTCAATAGTGATAGTGGTAATAGCGATAGTGTTCCTGTTGTTGATGGAGTTGGCCACACTGAAGGTAGTACTCTTCTTCATGACGCAAATTGTTCTTCTTGGGGTGGCCTTCCAAAGTACTTGCAAGACTGTGCTGGAAGCCATCATCTTCGTCTTCGTCATGCACCCTTTTGACATTGGAGACCGTTGCGTCATTGATGATGTTCAGATGATTGTGGAAGAGATGAATATCTTATCAACAGTATTTCTTCGATATGACAACGAGAAAATCTATTACCCAAACGCAGTTTTGCTGAATAAGCCAATAAGCAATTTCTATAGGAGTCCTGAAATGTGGGATGCTATTGATTTCACAATTGATGTTACAACTCCAACAGAGACCATTATTGCACTCAAGAAAGCCATTCAAACGTACATTGAGAGCAAACCAAAGTACTGGAATCCAAAGCACTCAGTGATAGTGAAACAGATCGAGAATATAGATAAGCTGACGCTGTGCCTTTGTGTTCAACACACCATCAACCATCAGAACTATGGGGAACGAAACAACAGGATCACTGAGCTTCTCTTGGAGCTCAAGAAGATCTTCGAGATCCATGAAGTTAAGTACCATCTTCTTCCTCAGGAGATCCACATCACCAGGATGAGCACTGAAAACGGCAGAGCTGTGTTATAA 2760 0.4728 MCLTYAPIRILTTTHRTQPPQYLPCQVTKTTITTSVQLFFVFSPLHVLLYLCSHASSMVVDGLLCRHWCVLLHSTSSHGWGLNHSVSSSLAEHDGDDDGLISNKEDYNAFGWQERYKVAIGIAKALDFLHNGFVEAVIHKDVRSSNIILSDDFEPQLANFGLASWGSSSFHVTCYDVTGTFGKILFKHLHALYISTITTPPYRTSMEKSRSDQVVLFIDHLKADPPSLEPHQNDHTTTTTSNHHPDNVKPKTLTSRSIKTLNRLSFSKPKSRILEHTHLPPPYTNKLAISEDTDTVQSSTDDEWDSLDDEEESELEEQDGAEHGLKSRQKQKRHRRKIPWRRVVEWALFIIILAGLVSSITISSIKSKHLWGLEIWKWCLMVMVTFSGRLVSGWLVAVAVFIIERNFMLREKVLYFIYGLRKSIRNCIWLALVLFSYWTVVFDSVQKKNHKFLNKVFQALVAILVGAIIWLVKIVLVKMLASSFHVATYFDRMKESVFHHYILDTLSGPPMEENEEEDTWQRLKASKSMPSKWNKGKAMMKETKKWEKLGSRRIDMEKLRKLSMESTASAWSVKRLVNYVRSSGLSTISRSVDDFGTAESEINSEWEARSCAQRIFKNVAKPGAKYIEEEDLRRFLKRVEIHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASSIVIVVIAIVFLLLMELATLKVVLFFMTQIVLLGVAFQSTCKTVLEAIIFVFVMHPFDIGDRCVIDDVQMIVEEMNILSTVFLRYDNEKIYYPNAVLLNKPISNFYRSPEMWDAIDFTIDVTTPTETIIALKKAIQTYIESKPKYWNPKHSVIVKQIENIDKLTLCLCVQHTINHQNYGERNNRITELLLELKKIFEIHEVKYHLLPQEIHITRMSTENGRAVL 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2031 919 MobiDBLite consensus disorder prediction 224 254 - -
Bisa11g2031 919 Gene3D Transferase(Phosphotransferase) domain 1 92 188 - -
Bisa11g2031 919 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 229 913 IPR016688 -
Bisa11g2031 919 Pfam Mechanosensitive ion channel 695 897 IPR006685 GO:0016020|GO:0055085
Bisa11g2031 919 MobiDBLite consensus disorder prediction 230 254 - -
Bisa11g2031 919 Gene3D - 751 800 IPR023408 -
Bisa11g2031 919 FunFam Predicted mechanosensitive ion channel 751 800 - -
Bisa11g2031 919 MobiDBLite consensus disorder prediction 275 330 - -
Bisa11g2031 919 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2031 919 SUPERFAMILY Sm-like ribonucleoproteins 742 800 IPR010920 -
Bisa11g2031 919 SUPERFAMILY Protein kinase-like (PK-like) 106 181 IPR011009 -
Bisa11g2031 919 ProSitePatterns Tyrosine protein kinases specific active-site signature. 137 149 IPR008266 GO:0004672|GO:0006468
Bisa11g2031 919 MobiDBLite consensus disorder prediction 296 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2031 Bisa-ChrBisa11 43259459 43275264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2031 207 909 Mechanosensitive Ion Channel Family AT5G12080 42.995 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa11g2031 MS_channel 2.1e-21 No_clan