Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2014 ATGGCCGGCGACGATCGTCCTCCCTTCAACGACAATATCTCAGTCATACTAATCGCCATGGGCTCCGCCGCCTTCATCGTCACAATGTACCATCTCATCGCCGTCTGTCTCTGCAGCCAGCAATTCTCCGATCGAAATCCAGACCAGCGGCCACCGCACCGGAACGTTCCGGTAGATGGAGCGACGGCGCATACGCCTGTGGCGCTTCTGATTCCGGCGCACAAGTACAAGAAGAAGATTGGTGATGACGTGGCGGGTCACGCGACTTGCGCAGTGTGCTTGGGAGATTTCGAGGACGATGAGGAGTTACGGACGTTGCCGGAATGCGCTCACTCTTTCCACGTGAACTGCATCGATACGTGGCTCAATTCTCATCGGAACTGCCCTGTTTGCCGCGCCGACGCAACGCCGTCGCCGGCAGTGCCCCGCCGCTCGCTGGAGTCTGGTCCCGGCGAATCAGAAGCGCACGATCATAGGTTACATATTAATATTGTGCACAATGCTTTGGTCCAAAGTGCGTTGATGCGACGGTGA 534 0.5712 MAGDDRPPFNDNISVILIAMGSAAFIVTMYHLIAVCLCSQQFSDRNPDQRPPHRNVPVDGATAHTPVALLIPAHKYKKKIGDDVAGHATCAVCLGDFEDDEELRTLPECAHSFHVNCIDTWLNSHRNCPVCRADATPSPAVPRRSLESGPGESEAHDHRLHINIVHNALVQSALMRR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2014 177 CDD RING-H2_EL5-like 90 132 - -
Bisa11g2014 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 139 IPR013083 -
Bisa11g2014 177 MobiDBLite consensus disorder prediction 137 156 - -
Bisa11g2014 177 SUPERFAMILY RING/U-box 82 138 - -
Bisa11g2014 177 SMART ring_2 90 131 IPR001841 -
Bisa11g2014 177 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Bisa11g2014 177 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 13 138 IPR044675 -
Bisa11g2014 177 Pfam Ring finger domain 89 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2014 Bisa-ChrBisa11 42969640 42970173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2014 11 156 C3H Transcription Factor Family AT1G72220 35.119 9.82e-22 89.0