Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2007 ATGGGCATTTGTCTGATGAAATGGCAATGGCCATGGCTTGTTTATGTTCTGCTGACATGTATTGTAATCAATAAAAATGAAGCAATCAGTCCTGATGGTGAGGCACTTCTCAATTTCAGGACAGCAGTTCTTAGCTCAGATGGTATCCTATTACAATGGAGGCCTGAGGATCCTGACCCATGCAAATGGAAAGGAGTGAAATGTGATCCAAAGACCAAGAGAGTGACATATCTGAGTCTAGCTCGCCATAAGTTGAGTGGGTCTATATCACCTGACCTGGGGAGGCTAGAGCATCTGACTGTTCTTGCTCTTCACAACAACAATTTCTATGGGACAATTCCATCAGAATTGGGAAATTGCACTGAGTTGCAGAGAATATACTTGCAGGGCAATTACCTTAGTGGAATGATTCCAAGTGAATTAGGAAACCTTACACAGCTTAAAAGTTTGGATATATCAAGTAACTCCCTTGGTGGGAATATACCTCCATCACTTGGGAAGCTGTATAATCTTGGAAATTTCAATGTTTCAGCCAATTTTCTGGTTGGACCAATACCTTCTGATGGTGTGCTTGCTAACTTTACTGGAAACTCGTTTGTTGGAAATCGTGGTTTGTGTGGAGTGCAAATCAATATGACATGTAAAGCTGATGGTTCACCTGCAACAAATCAATCTTCAATGGACCAAAATCAAAATGAAAAGAAGAAATATTCTGGGCGGTTGCTTATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTAGTGGCACTTATGTGCTTCTGGGGGTGTTTTCTTTATAAAAAGTTTGGTAAAAATGACAGAAAAAGTCTGGCAATGGATGTTGGTGGAGGAGCATCAATTGTGATGTTTCATGGAGATCTGCCATATACTTCAAAAGACATCATCAAGAAACTGGAGACTTTGAATGAGGAACACATAATTGGTTGTGGGGGATTTGGAACAGTTTACAAGCTTGCAATGGATGATGGGAATGAATTTGCTTTGAAAAGAATTGTTAAGTTGAATGAGGGCTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGAAGCATAAAACACCGTTATCTAGTAAACTTACGAGGGTATTGCAATTCACCAACATCAAAGTTATTAATATATGATTACCTAGCTGGTGGCAGTCTTGATGAAGCACTTCATGAAAAATCTGAGCCACTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCAAGGATCATACACCGTGACATAAAATCAAGCAATATTTTACTTGATGGCAACCTGGATGCTAGAGTCTCTGACTTTGGGCTTGCCAAACTTTTGGAGGATGAAGAATCACATATCACCACCATTGTTGCTGGAACATTTGGTTATCTAGCCCCAGAGTATATGCAAAGTGGTAGGGCAACTGAAAAGACTGATGTTTACAGTTTTGGTGTCCTGGTACTGGAAGTGCTGAGTGGCAAGCGACCAACAGATGCATCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGCTGAATTTTCTCATTACCGAAAATAGGCCAAGAGAGATTGTTGATCCCCAGTGTGAGGGAGTACAGGTAGAGAGCCTCGATGCCTTGCTCTCTGTGGCTATTCAGTGTGTTTCTTCAAGTCCAGAGGATCGACCCACAATGCATCGAGTGGTCCAGGTGCTTGAATCAGAGGTCATGACACCATGCCCAAGTGACTTCTATGACTCCAATTCTGAGTAG 1782 0.4164 MGICLMKWQWPWLVYVLLTCIVINKNEAISPDGEALLNFRTAVLSSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTYLSLARHKLSGSISPDLGRLEHLTVLALHNNNFYGTIPSELGNCTELQRIYLQGNYLSGMIPSELGNLTQLKSLDISSNSLGGNIPPSLGKLYNLGNFNVSANFLVGPIPSDGVLANFTGNSFVGNRGLCGVQINMTCKADGSPATNQSSMDQNQNEKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRKSLAMDVGGGASIVMFHGDLPYTSKDIIKKLETLNEEHIIGCGGFGTVYKLAMDDGNEFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLAGGSLDEALHEKSEPLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRPREIVDPQCEGVQVESLDALLSVAIQCVSSSPEDRPTMHRVVQVLESEVMTPCPSDFYDSNSE 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2007 593 Gene3D Phosphorylase Kinase; domain 1 283 383 - -
Bisa11g2007 593 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Bisa11g2007 593 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Bisa11g2007 593 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Bisa11g2007 593 ProSiteProfiles Protein kinase domain profile. 308 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2007 593 Pfam Protein kinase domain 310 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2007 593 Gene3D Transferase(Phosphotransferase) domain 1 384 582 - -
Bisa11g2007 593 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 75 576 - -
Bisa11g2007 593 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 282 383 - -
Bisa11g2007 593 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 384 586 - -
Bisa11g2007 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Bisa11g2007 593 SMART serkin_6 308 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g2007 593 SUPERFAMILY Protein kinase-like (PK-like) 292 575 IPR011009 -
Bisa11g2007 593 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Bisa11g2007 593 SUPERFAMILY L domain-like 30 195 - -
Bisa11g2007 593 ProSitePatterns Protein kinases ATP-binding region signature. 314 340 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2007 Bisa-ChrBisa11 42881360 42908343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2007 1 584 Receptor kinase-like Gene Family AT2G35620 76.027 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Bisa11g2007 Pkinase 4e-46 CL0016