Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2003 ATGAAGCAGCCATCGAAGCCATGGAGGCCATTCACGGCGAATTGCTGCTCCACAAAGGACCAAACCATCTTCGGAAACTTCAGCCGATGCAAGCCGACGTCGCGGTCGGATTTGTCGAAGGACGTTGCTCCGCTGCCGTCGTTTCGGAGGCTGTCGTTCTCGGATCTCAGCCGGTCGTCGTCGGTGCGAATCAACGAGGATCTGGCGCAGTCGTTCGGGTCGGATCTGCACGATTTTCAGCTGAGCGAGCTGCGAGCCATAACGCAGAATTTCTCGAGCAATTACTTGTTGGGAGAAGGAGGGTTCGGGACAGTGCACAAGGGTTACATCGACGACCACATGAGGCAGGGCTTGAAGGCACAGCCCGTCGCTGTTAAGCTTCTCGACATTGAAGGTTTACAAGGACATCGTGAATGGCTTGCAGAAGTAATATTTCTTGGGCAGCTAAGGCATCCCAACTTGGTGAAGCTGATTGGGTATTGTTGTGAGGAAGAAGAACGGCTCCTTGTCTACGAATTCATGCCAAGAGGAAGCTTGGAGAATCACCTGTTCAGAAGGCTGACATCACTACCCTGGGCAACCAGACTAAGCATTGCAATAGGTGCAGCTAAAGGCCTCTCCTTCTTACATGGAGCAGAGAAGCCTGTCATATACAGGGACTTCAAAACTTCCAATGTCTTGCTTGATTCAGATTTCACAGCTAAATTGTCAGATTTTGGACTGGCAAAAATGGGGCCGGAAGGATCAAAATCACATGTTACAACCAGAGTCATGGGCACCTATGGATATGCAGCCCCAGAATATGTGTCAACAGGTCATTTAACCACCAAAAGTGATGTGTATAGCTTTGGAGTAGTCCTGCTAGAACTCCTCACAGGAAGGAGAGCAATGGAGAAGACAAGACCAAAGACTGAGCAAAGCCTTGTGGATTGGTCAAGACCTTACTTGAATAGCAGTAGGAAGTTGAGGTATATTATGGATGCAAGGCTTGCAGGCCAATATTCTGTAAAGGGTGCAAAGGAAATGGCTCTTTTGGCACTGCAATGCATAAGTATGAATCCTAAAGACAGGCCAAGGATGCCAGAAATTGTTGACAGACTTGAAAACTTGAAGCAGTTTAAGGACATGGCTATTTCCTCTGGACACTGGTCTGCATCGCCAAAATCTAGAAATGGAGCTTCCAATAAGGTCAAAATTGATATCAGACCCGGTGCAAATGCAAACCAAAGGAAGCCATCTCCTGTAGTTGCAAGCAAAAAGTCTTGA 1266 0.4795 MKQPSKPWRPFTANCCSTKDQTIFGNFSRCKPTSRSDLSKDVAPLPSFRRLSFSDLSRSSSVRINEDLAQSFGSDLHDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDHMRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRLTSLPWATRLSIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYVSTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQSLVDWSRPYLNSSRKLRYIMDARLAGQYSVKGAKEMALLALQCISMNPKDRPRMPEIVDRLENLKQFKDMAISSGHWSASPKSRNGASNKVKIDIRPGANANQRKPSPVVASKKS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2003 421 SUPERFAMILY Protein kinase-like (PK-like) 73 368 IPR011009 -
Bisa11g2003 421 FunFam Serine/threonine-protein kinase PBS1 174 382 - -
Bisa11g2003 421 ProSitePatterns Protein kinases ATP-binding region signature. 97 126 IPR017441 GO:0005524
Bisa11g2003 421 MobiDBLite consensus disorder prediction 381 421 - -
Bisa11g2003 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Bisa11g2003 421 FunFam Serine/threonine-protein kinase BIK1 57 173 - -
Bisa11g2003 421 PANTHER OS01G0588500 PROTEIN-RELATED 59 371 - -
Bisa11g2003 421 Pfam Protein tyrosine and serine/threonine kinase 96 367 IPR001245 GO:0004672|GO:0006468
Bisa11g2003 421 CDD STKc_IRAK 97 370 - -
Bisa11g2003 421 Gene3D Transferase(Phosphotransferase) domain 1 174 385 - -
Bisa11g2003 421 Gene3D Phosphorylase Kinase; domain 1 54 173 - -
Bisa11g2003 421 ProSiteProfiles Protein kinase domain profile. 91 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2003 Bisa-ChrBisa11 42848676 42852574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2003 79 394 Glycoside Hydrolase AT3G07070 49.688 6.41e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa11g2003 PK_Tyr_Ser-Thr 1.4e-47 CL0016