LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g1968	ATGGCAACAGCAGCGGGGGGAGACACATGGAAGGCCCATTTGGCTATGGCGATTTCGCAGGTATTATATGGAGGCTACCATGTCGTCACCAAAGTCGCTCTCAATGACGGGGTCAATCAGTTAGTCTTCTGCTTCTACCGCGATCTCCTTGCTATTGCTATTCTCGCTCCCATCGCTATTATTCGTGAAAAACGGACACGACCACCCTTGACTATGCACGTTCTGATGTCATTCTTCTTTCTTGGATTAACTGGGGTGTTTGGCAACCAGATTTTGTTTCTTCTTGGTTTAAGCTACACCAATCCAACTTATGCTTCTGCCACACAACCAGCTATTCCTGTCTTTACATTTCTCTTGGCTGTGATGATGGGTACAGAAAGAGTGAACTTGCTCAGACCTGAAGGTCTAGTGAAGGTTGGAGGAACTTTAGTCTGTGTTTCTGGTGCCGTATTTATGGCTTTGTATCGTGGTCCAACACTGATAGGTTACCCAGAATTGGACAATATTGTCGGAAGTGAAAATAGTGCCAAAGGTCAACCTGAGCTGCCTGGATGGCTAACTGATGGTCTGTTGGGCCTTAGGTTAGACCTATTTCATATTGGACTTCTGTGCTTGATAGGAAACTGCATATGCATGGCTGCTTATATAGCCATTCAGGCTCCTGTATTAAAAAAGTATCATGCCAACCTATCTGTCACAGCATATTCATACTTTTTTGGAGTTTTGCCAATGGTGATAACAGCATTCTCCATCACTAGTGAATCAACAGACTGGAGTTTGAGGCAGTCAGAAATAATTGCTGTTATTTATGCGGGAGTAATTACATCTGCACTTTGTTATGGACTCTTGACATGGTCCACTAAAATCTTGGGGCCAGCTATGGTTGCCCTTTACTACCCACTTCAACCTGCAGCTTCTTCCTTCCTGTCACAAATTTTCCTTGGAACTCCAATTTATTTGGGAAGTATCATAGGGGGATCTTTAATTATTGCTGGACTATATGCGGTTACTTGGGCAACTTCTAGAGAAAATCAGGCAGCTCTTGAAGTTACTCCTCATGATCCTCATCCCTCTTGGGTCTCTGAACCTCTTGTGCGTGGGGATGGTCTACTCAACAGGAATTCCTACTCAAGAGGTGTATCAGTATCATCAAAGCCTTCGGATTAA	1167	0.4404	MATAAGGDTWKAHLAMAISQVLYGGYHVVTKVALNDGVNQLVFCFYRDLLAIAILAPIAIIREKRTRPPLTMHVLMSFFFLGLTGVFGNQILFLLGLSYTNPTYASATQPAIPVFTFLLAVMMGTERVNLLRPEGLVKVGGTLVCVSGAVFMALYRGPTLIGYPELDNIVGSENSAKGQPELPGWLTDGLLGLRLDLFHIGLLCLIGNCICMAAYIAIQAPVLKKYHANLSVTAYSYFFGVLPMVITAFSITSESTDWSLRQSEIIAVIYAGVITSALCYGLLTWSTKILGPAMVALYYPLQPAASSFLSQIFLGTPIYLGSIIGGSLIIAGLYAVTWATSRENQAALEVTPHDPHPSWVSEPLVRGDGLLNRNSYSRGVSVSSKPSD	388

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g1968	388	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	46	155	-	-
	Bisa11g1968	388	Pfam	EamA-like transporter family	200	337	IPR000620	GO:0016020
	Bisa11g1968	388	Pfam	EamA-like transporter family	12	137	IPR000620	GO:0016020
	Bisa11g1968	388	PANTHER	WAT1-RELATED PROTEIN	14	344	IPR030184	GO:0016020\|GO:0022857
	Bisa11g1968	388	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	260	342	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g1968	Bisa-ChrBisa11	42209545	42214973	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g1968	95	368	Nodulin-like Gene Family	AT5G45370	63.177	2.64e-117	340