Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1943 ATGCCCCACAGGATTAAAGACAAAGCTGCATTCATACTTGCAATAAAAGCAAATTTATCAGTTACCTTAGATACACACATTCCGAGACTAGCTAGGGTTATAAAACCAGGCTTTGCTTTGACGGTTTCATCTCATCCTCCTAATCAGCCATATATTCCTTCTGATCCTCTAATCCCACTCTTCCAACCATTCTCAGCGGCTGATGACGATTACAATCCTCACTTCCCTTGCTTCCCCTCCTTCATTGACTCTCAGTCTTCTTCCTTCCCCTTCCTTCCCTCACTAGACCAGTTCGGGCCATTTCCCTCGAGCTCCCTCTACCATCATTCAGCATCACAGGCTTCTAGTAGCAGTACTGTAGTCTTCGCCACCCCCTTCTCTGCTGTTCCACCTGCATCATTTTCCAATACAGCCACTCCCACTCCTTCAAGATCCGATGGTGGTGCAGGTGCCCTTACAACACCACCACATTCTTGTGAGGCTGACCACCAGCCTGGTGATCCCACGGCCGTTACACTTACACCTACTCATCCACCGCCACGGCCCTCACCCAACGAAGCGGCTGCTGCTACTGCTACTAGTGCACGAGTCACGACGGGAGTCCCTAGTGCCAAGCGGAAGCGTGGCCGACCGAGGAAGAATTTTCGCGAGTCTTCCTCCGCTATTGCTGGTCCTGGAAGGCGAGAACCGTCGAAGGCAATTCCTCCTCCACAAGAGGCTACGGCGTCGTCTTCTAGGAGAAAGAAGAAGGACCAAGGGCAAGCTTCAAGAAGCAAAGGAGAAAACAAGGATCCTTCGTCCAAAGTGAAACTCAATAAACGAAGCACCACATTGGGTCTCGTCCTGCAGTCTGATATTGCAAGTTTGCACCCACCGTACGATGTGTCTGAGAAGATAATATCCTTCACCAGAGACAATGGGGCTGTTTTCATATCAACCGCATGTGGTGTCTTGTCTTATGTTGAGCTCCTGGAACCTTCAGAACCAGCTGTCACAAGATTTGAGGGAAAATTTAATATTTTGATGCTCTCAGGGATACTTTTACTGAGTAGAGATGGTCAAAGTAGATCAGGCCATTTAACAATTTCAATGACTCAATTAGATGGCAGAGTTATAGGGGGAATGTTCATGGACGATTAA 1140 0.4833 MPHRIKDKAAFILAIKANLSVTLDTHIPRLARVIKPGFALTVSSHPPNQPYIPSDPLIPLFQPFSAADDDYNPHFPCFPSFIDSQSSSFPFLPSLDQFGPFPSSSLYHHSASQASSSSTVVFATPFSAVPPASFSNTATPTPSRSDGGAGALTTPPHSCEADHQPGDPTAVTLTPTHPPPRPSPNEAAAATATSARVTTGVPSAKRKRGRPRKNFRESSSAIAGPGRREPSKAIPPPQEATASSSRRKKKDQGQASRSKGENKDPSSKVKLNKRSTTLGLVLQSDIASLHPPYDVSEKIISFTRDNGAVFISTACGVLSYVELLEPSEPAVTRFEGKFNILMLSGILLLSRDGQSRSGHLTISMTQLDGRVIGGMFMDD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1943 379 MobiDBLite consensus disorder prediction 133 272 - -
Bisa11g1943 379 MobiDBLite consensus disorder prediction 243 270 - -
Bisa11g1943 379 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 176 375 IPR039605 GO:0003680
Bisa11g1943 379 CDD DUF296 294 374 IPR005175 -
Bisa11g1943 379 ProSiteProfiles PPC domain profile profile. 279 379 IPR005175 -
Bisa11g1943 379 Pfam Plants and Prokaryotes Conserved (PCC) domain 288 377 IPR005175 -
Bisa11g1943 379 SUPERFAMILY AF0104/ALDC/Ptd012-like 286 378 - -
Bisa11g1943 379 Gene3D - 286 379 - -
Bisa11g1943 379 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1943 Bisa-ChrBisa11 41825046 41827206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1943 167 374 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 29.778 7.20e-13 67.4