Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1922 ATGAGCAAAGTTTGGCTTGTGGTGCTCGTCATCTTCTACAGTGGTTTCTCTTCAAAAGGAAGCAGTAACTCCTCTTCTCCGAGACCAAGCGTCGTCAACATTGGGGCAGTTATATCTTTCAATTCAACCATTGGCAAAGTGGCAAAAGTTGCAATTGAAGCAGCAGTGGATGATATAAACTCCAATCAAATGGTTCTCAAAGGAACTAAGCTTAATATCTCCATGAAGAACACAAACATCTCCAGTGGATTTCAGGGAATCATTGATTCTTTACTGTTGATGGAGAAAGATCCAGTGGCCATAATTGGCCCTCAGTACTCAGTCATGGCTCATGTGATTTCTCACATAGGAAATGAGCTTCAAGTGCCTCTCCTGTCATTTGCAGCCACAGACCCCTCTCTGTCTTCACTTCAGTTCCCATATTTTGTGAGGACAACACACAGTGATCTGTTCCAGATGACAGCTGTGGCAGAAATTGTGAACTACTATCAATGGAGAGATGTCATAGCTATTTTCATTGATGATGATCATGGAAGAAATGGGATAGCTGCATTAGGGGATACACTAGCTGAGAAACGGCGTAGAATCTCATACAAGGCACCCCTTAAACCTGATAATTTAAGCCAGGAAGATATAACAAACGCCTTACATAAAGTAGCTTTAATGGAGTCAAGGGTTATAGTTCTCCACATATACCCTAGTTTTGGTCTGAGAGTACTTCAAGTGGCCAAGTCTCTTGGAATGATGGGAAATGATTCTGTGTGGATAGCCACTGATTGGCTTTCAACTATTCTAGATACAGACCTTCCCCTATCCTCTTCTTCATCCATGAATGACCTCCAAGGAGTTCTTGCCTTGCGTCTGTACACCCCAGATTCAGTAACCAAAAGGGATTTTGTTTCTAGGTGGATCAACCTAACTAGCCACAAAGCTCCTAATCAAGATCCCTTTGGGTTGAATGTTTATGGTCTATACGCATATGACACAGTCTGGATTCTAGCATATGCACTTGATGCATATTTTACCAACGGAGGAACTTTCTCATTTCCAAATGACTCAACTCTGAACGTGCTAAAGGGGAATGATAATAATTATAATAATAGCTTGCATCTTGACACTATAGAGGTCTTCTCTAATGGCAATAGGTTGCTTCAAAACATTTTAGAGGTCAATAGAACTGGTTTAACAGGTCAATTGATGTTTGGTTCAGAAGGGAACTTCGGGCATCCTGCATATGAAATCATCAATGTGATCAACACGGGGATTAAAAGGATCGGTTTCTGGTCAAAATCCAATGGCCTCCACACTGGTGAAGAACCTAACCATTCCAACTCCAATGGAGGCCTGTGTAACGTCACGTGGCCCGGTCAAGCAAACCATCAAACACCTCGCGGGTGGGTTTTTGCCAGAAACGGAAGGCCTCTGAGAGTTGGGGTGCCACTCAGAATCAGCTACCCTGAATTTGTGTCAAGAACTGAAAGCTCTGAAAAATTCAGTGGATACTGCATAGACGTGTTCACAGCCGCACTGAAGCGTTTGCCTTATTCAGTTCCATACGAGTTCATCCCATTCGGAGATGGCAGAACCAACCCATCAAACTCAGAGCTCCTAAACAATATCACAACCGGTGAGTTTGATGCTGTGGTGGGAGACATTACCATAACCACAAACAGAACGAAGATAGTGGATTTCACACAGCCGTATATAGAGTCAGGGCTCGTCGTTGTGGCTCCAATAAGGAAGTTGTACTCCAGTGCTTGGGCTTTCCTGAGACCGTTTACTCCATGGATGTGGTGTGTGACGGGACTGTCCTTCTTCGCTGTCGGAGCTGTTGTGTGGATTCTAGAGCGTCGCAATAACGATGACTTCAGGGGCACTTCAAGAAGGCAACTCGCCACCATTATATGGTTTAGCTTTTCAACCTTGTTTTTTTCACATAAAGAGAAGACGGCAAGCACACTGGGTCGCATAGTGCTGATAATATGGTTATTTGTGGTTCTGATACTGAACTCCAGCTACACGGCGAGCCTGACGTCCATCCTGACGGTGGAGCAACTGTCTTCGCCGGTGAATGGGATCGACAGCTTAGTGACGAGCAACGATCGCATAGGGTACCTGAAGGGGTCGTTTGCAGTGAATTATCTGAACGAGGAGCTCAACATCCAGAAATCGAGGCTGGTTCCTCTGAACTCCCCATCTGAGTTCGAGAAGGCCTTGGAAGATGGGCCCGCCAATGGTGGGGTTGCCGCTGTAATTGATGAACGCGCTTACATGGAGCTTTTCCTCTCAACCAGATGTCAATTTGGTATTGTTGGTCAAGAGTTCACCAAAATGGGTTGGGGCTTTGCTTTGCCAAGAGACTCTCCTCTGGCAATAGAGATATCAACGGCCATCCTAACGCTATCAGAAACGGGGGACCTCCAGAAGATTCATGACACGTGGGTCACAAGAAGCGCGTGCAGCTCGGAAGGCGCAAAGCAAGGCGCACACAGGCTCGACCTCAACAGCTTCTGGGGCCTATTCCTGTTAACCGGCTCCGCCTGCTTCCTCTCTCTCCTCTGTCATCTCCTCAGAATGGCTCACCGTTTCAGCCAGCGATCCCATAACCTCAACCTTAAGGGCTCCGCTCGCGTCAGAGCGTTCCTTTCCTTTGTGAATGAGGAAGAAGAAGACTATGATGATGATGAAAACAAGAAGAAGCCCAAGAGAAAGCGAGACCAAACTGTAAGAGCGAAGAGTGGAAGGGTAGTGCACGATGAAGATGGGAGGCCAGTTAATGTTAGTCTCCACCTTCATAATGATGCCCAACTCTAA 2814 0.4598 MSKVWLVVLVIFYSGFSSKGSSNSSSPRPSVVNIGAVISFNSTIGKVAKVAIEAAVDDINSNQMVLKGTKLNISMKNTNISSGFQGIIDSLLLMEKDPVAIIGPQYSVMAHVISHIGNELQVPLLSFAATDPSLSSLQFPYFVRTTHSDLFQMTAVAEIVNYYQWRDVIAIFIDDDHGRNGIAALGDTLAEKRRRISYKAPLKPDNLSQEDITNALHKVALMESRVIVLHIYPSFGLRVLQVAKSLGMMGNDSVWIATDWLSTILDTDLPLSSSSSMNDLQGVLALRLYTPDSVTKRDFVSRWINLTSHKAPNQDPFGLNVYGLYAYDTVWILAYALDAYFTNGGTFSFPNDSTLNVLKGNDNNYNNSLHLDTIEVFSNGNRLLQNILEVNRTGLTGQLMFGSEGNFGHPAYEIINVINTGIKRIGFWSKSNGLHTGEEPNHSNSNGGLCNVTWPGQANHQTPRGWVFARNGRPLRVGVPLRISYPEFVSRTESSEKFSGYCIDVFTAALKRLPYSVPYEFIPFGDGRTNPSNSELLNNITTGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKLYSSAWAFLRPFTPWMWCVTGLSFFAVGAVVWILERRNNDDFRGTSRRQLATIIWFSFSTLFFSHKEKTASTLGRIVLIIWLFVVLILNSSYTASLTSILTVEQLSSPVNGIDSLVTSNDRIGYLKGSFAVNYLNEELNIQKSRLVPLNSPSEFEKALEDGPANGGVAAVIDERAYMELFLSTRCQFGIVGQEFTKMGWGFALPRDSPLAIEISTAILTLSETGDLQKIHDTWVTRSACSSEGAKQGAHRLDLNSFWGLFLLTGSACFLSLLCHLLRMAHRFSQRSHNLNLKGSARVRAFLSFVNEEEEDYDDDENKKKPKRKRDQTVRAKSGRVVHDEDGRPVNVSLHLHNDAQL 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1922 937 CDD GluR_Plant 473 814 - -
Bisa11g1922 937 MobiDBLite consensus disorder prediction 910 924 - -
Bisa11g1922 937 Pfam Bacterial extracellular solute-binding proteins, family 3 482 815 IPR001638 -
Bisa11g1922 937 SMART GluR_14 476 817 IPR001320 GO:0015276|GO:0016020
Bisa11g1922 937 FunFam Glutamate receptor 470 586 - -
Bisa11g1922 937 MobiDBLite consensus disorder prediction 892 924 - -
Bisa11g1922 937 FunFam Glutamate receptor 148 307 - -
Bisa11g1922 937 SUPERFAMILY Periplasmic binding protein-like I 27 466 IPR028082 -
Bisa11g1922 937 SUPERFAMILY Periplasmic binding protein-like II 461 817 - -
Bisa11g1922 937 Pfam Ligand-gated ion channel 816 847 IPR001320 GO:0015276|GO:0016020
Bisa11g1922 937 Gene3D - 587 725 - -
Bisa11g1922 937 FunFam Glutamate receptor 712 819 - -
Bisa11g1922 937 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bisa11g1922 937 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bisa11g1922 937 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bisa11g1922 937 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016020
Bisa11g1922 937 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Bisa11g1922 937 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 326 338 - -
Bisa11g1922 937 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Bisa11g1922 937 CDD PBP1_GABAb_receptor_plant 33 434 IPR044440 -
Bisa11g1922 937 Gene3D - 735 822 - -
Bisa11g1922 937 Gene3D - 148 434 - -
Bisa11g1922 937 SMART AABind_6 474 818 IPR001638 -
Bisa11g1922 937 Pfam Receptor family ligand binding region 50 418 IPR001828 -
Bisa11g1922 937 Gene3D - 50 409 - -
Bisa11g1922 937 Gene3D - 469 586 - -
Bisa11g1922 937 FunFam Glutamate receptor 586 716 - -
Bisa11g1922 937 PIRSF IGluLR_plant 1 931 IPR017103 -
Bisa11g1922 937 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 892 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1922 Bisa-ChrBisa11 41496070 41501533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1922 1 914 Ion Channels AT1G42540 54.216 0.0 1007