Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1904 ATGGGTCTATGCTTTGGGTCTCCCGCTCACGATGATGGACCGGACTCCACTGTCAATACACATCCATATTCAGGTTCGGCAAGTACTGACAGTAGGAACGTTGGGTTTTCTATTACGACTAGCAGTGCTGGAAAGAGTCAATTTTCAGAAATAACTACTGAGAGCCTTGGGGATTCCTTTTCATCTCCCAGTGGGCAAATTCTAGAAACGCCAAACTTGAAGGTCTTCAGTTTTGGGGACTTGAAAACAGCCACACGGAATTTCAGACCTGATACATTGCTTGGTGAAGGTGGTTTTGGTAAAGTGTACAAAGGTTGGCTGGATGAGAAGACACTAACACCAACCAAGGCAGGGTCAGGAATGGTGGTTGCTATTAAAAAATTGAACTCAGAAAGTATGCAAGGATTCCAAGAGTGGCAGTCAGAAGTGAATTTTTTAGGAAGGCTTTCTCATCCCAACTTGGTCAAGCTATTGGGTTACTGTTGGGACGCTGAGGAGCTTCTTCTTGTGTATGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTCTTCAGAAGAAATCCTAACATTGAACCCCTTTCTTGGAGCATGCGGCTTAAGATTGCTATTGGTGCAGCTCGGGGACTGGCTTTCTTGCACACTTCAGAAAAGCAAGTGATATACAGAGATTTCAAGGCCTCAAATATACTACTTGATGCGAATTATAACGCCAAAATTTCTGATTTTGGTTTGGCGAAATTGGGCCCTTCCTTAGGAGAATCACATGTGACTACTAGGATAATGGGCACATATGGCTATGCTGCTCCAGAATATATTGCAACAGGTCACTTGTATGTAAAGAGCGATGTGTATGGCTTCGGTGTAGTGCTGCTTGAAATGCTGACAGGGTTGAGGGCACTTGATACAAAGCGACCTACTGGGCAGCATAATCTGGTTGAATGGGTGAAGCCATATCTTTCTAGTAAAAGGAAGTTAAAAACCATAATGGATGCTAAGATTCAGGGCCAATATTCACACAAGGCAGCAACACAAGCAGCTCAGCTTGCTCAAAAATGCCTACAACCGGAACCTAGAAACCGTCCTTCCATGAAAGAAGTACTTGAGGTATTGATAAGCATTGAAACCATCAAAGACAAAGTAAAGGAACCCAAGCCCCGTGCTTAA 1164 0.4381 MGLCFGSPAHDDGPDSTVNTHPYSGSASTDSRNVGFSITTSSAGKSQFSEITTESLGDSFSSPSGQILETPNLKVFSFGDLKTATRNFRPDTLLGEGGFGKVYKGWLDEKTLTPTKAGSGMVVAIKKLNSESMQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDAEELLLVYEFMPKGSLENHLFRRNPNIEPLSWSMRLKIAIGAARGLAFLHTSEKQVIYRDFKASNILLDANYNAKISDFGLAKLGPSLGESHVTTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPTGQHNLVEWVKPYLSSKRKLKTIMDAKIQGQYSHKAATQAAQLAQKCLQPEPRNRPSMKEVLEVLISIETIKDKVKEPKPRA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1904 387 CDD STKc_IRAK 94 373 - -
Bisa11g1904 387 Gene3D Transferase(Phosphotransferase) domain 1 174 384 - -
Bisa11g1904 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bisa11g1904 387 Gene3D Phosphorylase Kinase; domain 1 72 173 - -
Bisa11g1904 387 ProSitePatterns Protein kinases ATP-binding region signature. 94 127 IPR017441 GO:0005524
Bisa11g1904 387 MobiDBLite consensus disorder prediction 13 31 - -
Bisa11g1904 387 MobiDBLite consensus disorder prediction 1 31 - -
Bisa11g1904 387 FunFam Serine/threonine-protein kinase BIK1 56 173 - -
Bisa11g1904 387 FunFam Serine/threonine-protein kinase PBS1 174 386 - -
Bisa11g1904 387 ProSiteProfiles Protein kinase domain profile. 88 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1904 387 SUPERFAMILY Protein kinase-like (PK-like) 61 370 IPR011009 -
Bisa11g1904 387 PANTHER OS01G0588500 PROTEIN-RELATED 46 371 - -
Bisa11g1904 387 Pfam Protein tyrosine and serine/threonine kinase 92 370 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1904 Bisa-ChrBisa11 41236789 41240598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1904 74 378 Glycoside Hydrolase AT3G07070 50.654 3.39e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa11g1904 PK_Tyr_Ser-Thr 2.4e-49 CL0016