Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa11g1896 | ATGGGAGGTGACAGTGCCCTTGATGATGCGACCGCCACCCAGTCCAAGGGCAGTGATGGAGTGAGTATCAACGTTCGATGCTCCAATGGTTCGAAATTCTCGGTTCAGATAAGCCTCGAATCAACTGTCGGATTGTTCAAGGAACTTGTCGCTCGGAATTGCGATATCCCAGCCGAACAACAGCGGTTGATTTACAAGGGTCGGATCTTGAAGGACGATCAAACTCTTCAAAGCTATGGTTTGGAGGCGGATCACACTGTCCATTTGGTTCGTGGCTTTGCCCCATCTTCAACTACCAATACAACTGGTGGGACCAATGCCACTGGTACAAATACCACAACCAATAATGCAAGAGGTGCTTCTAATGAAGGTGGCGGTTTAGGAGGACCTGGTATTGGAGATTCATCGTTTCCTGGACTAGGTATTAATGGGCTTGGAGGAAGTGGTGTCAATGGTTTGTTTGGAGCTGGCCTTGCGGATCTTGAACAAATGCAGCAACCATTTCTTTCTAATCCCAATATGATGAGAGAAATGATGAACACACCTGCTATACAGAATCTAATAAATAATCCTGAGATAATGCGGAGTCTTATAATGAGCAACCCTCAATTGCGAGAGCTCATGGATCGAAATCCTGAGCTAGCACACATACTTAATGATCCTGCCACCCTACGTCAGACACTTGAAGCTACAAGAAACCCTGAGATCATGCGTGAAATGATGAGAAATACTGACAGAGCAATGAGCAACATTGAATCTTCTCCTGAGGGATTTAACATGTTGAGGCGCATGTATGAAAATGTTCAAGAGCCATTCTTAGATGCCACAACAATGGCTGGTAATACAGGAACTGATAACTCTAACCCTTTTGCTGCACTCTTGGGAACTCAAGTTGGACAAGCCAGGGATCGATCAACTAATCCTTCAACTACTGGTGCTGAAGCAACGGCTGGTTCTCCCTCCCCTAATACAAATCCACTTCCTAACCCTTGGGGCTCTACTGGAACTGGAGGTGCCCAAAATAACTCTCCAAGGACAACAACTGGTGGGGATGCTAGGCAGCAGGCACCTGCTGCACCTGCTGGCTTAGGAGGACTTGGTCTGCAGGATTTTCAAGGCATGTTGGGTGCTATGCCTGATCCTGCCTTATTGACTCAGTTAATGCAAAATCCAGCCATTTCACAAATGATGCAAAGTATTCTTTCCAACCCACAGGCTATGAACCAGATTCTTGGTGTCAATCCTGAGCAGCGCGGTGTACCAGACCTTAATTCGCATCTTAGAGAAGTGATGCAAAATCCTGAGTTCCTTCGCATGTTTTCTTCGCCTGAGACAATGCAGCAACTCTTGTCTTTTCAGCAGACTCTTCTTTCTCAGCTTGGTCGGTCACCGTCAACCCAGGAATCAGGTCAGACTGGTGGAGGCACTGGAGCAATGAACAACACAGGGTTGGAGATGTTGATGAACATGTTTGGTGGACTTGGGGCTGGTAGTCTAGCTGTTCCGAACAGATCAAATGAGCCGCCGGAGCAATTGTATGCCACTCAGTTGTCACAGCTTCAAGAGATGGGCTTCTTTGACACTCAAGAGAACATTCGAGCTCTTGTTGCCACTTCAGGGAATGTTCATGCCGCAGTTGAACGACTTCTGGGGAATTCTGGTCAGTAG | 1668 | 0.4706 | MGGDSALDDATATQSKGSDGVSINVRCSNGSKFSVQISLESTVGLFKELVARNCDIPAEQQRLIYKGRILKDDQTLQSYGLEADHTVHLVRGFAPSSTTNTTGGTNATGTNTTTNNARGASNEGGGLGGPGIGDSSFPGLGINGLGGSGVNGLFGAGLADLEQMQQPFLSNPNMMREMMNTPAIQNLINNPEIMRSLIMSNPQLRELMDRNPELAHILNDPATLRQTLEATRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLDATTMAGNTGTDNSNPFAALLGTQVGQARDRSTNPSTTGAEATAGSPSPNTNPLPNPWGSTGTGGAQNNSPRTTTGGDARQQAPAAPAGLGGLGLQDFQGMLGAMPDPALLTQLMQNPAISQMMQSILSNPQAMNQILGVNPEQRGVPDLNSHLREVMQNPEFLRMFSSPETMQQLLSFQQTLLSQLGRSPSTQESGQTGGGTGAMNNTGLEMLMNMFGGLGAGSLAVPNRSNEPPEQLYATQLSQLQEMGFFDTQENIRALVATSGNVHAAVERLLGNSGQ | 555 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa11g1896 | 555 | Pfam | UBA/TS-N domain | 513 | 549 | IPR015940 | - | |
Bisa11g1896 | 555 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 507 | 552 | IPR015940 | - | |
Bisa11g1896 | 555 | Gene3D | - | 196 | 254 | - | - | |
Bisa11g1896 | 555 | MobiDBLite | consensus disorder prediction | 94 | 121 | - | - | |
Bisa11g1896 | 555 | FunFam | Ubiquitin domain-containing protein DSK2b | 496 | 554 | - | - | |
Bisa11g1896 | 555 | CDD | UBA_PLICs | 513 | 551 | - | - | |
Bisa11g1896 | 555 | PANTHER | UBIQUILIN | 16 | 550 | IPR015496 | - | |
Bisa11g1896 | 555 | MobiDBLite | consensus disorder prediction | 460 | 481 | - | - | |
Bisa11g1896 | 555 | Gene3D | - | 8 | 105 | - | - | |
Bisa11g1896 | 555 | MobiDBLite | consensus disorder prediction | 299 | 364 | - | - | |
Bisa11g1896 | 555 | SUPERFAMILY | Ubiquitin-like | 12 | 107 | IPR029071 | - | |
Bisa11g1896 | 555 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bisa11g1896 | 555 | SMART | uba_6 | 513 | 551 | IPR015940 | - | |
Bisa11g1896 | 555 | ProSiteProfiles | Ubiquitin domain profile. | 21 | 90 | IPR000626 | GO:0005515 | |
Bisa11g1896 | 555 | MobiDBLite | consensus disorder prediction | 94 | 132 | - | - | |
Bisa11g1896 | 555 | FunFam | Ubiquitin domain-containing protein DSK2b | 18 | 104 | - | - | |
Bisa11g1896 | 555 | FunFam | Ubiquitin domain-containing protein DSK2b | 198 | 254 | - | - | |
Bisa11g1896 | 555 | SMART | ubq_7 | 21 | 92 | IPR000626 | GO:0005515 | |
Bisa11g1896 | 555 | MobiDBLite | consensus disorder prediction | 299 | 353 | - | - | |
Bisa11g1896 | 555 | CDD | Ubl_Dsk2p_like | 21 | 93 | - | - | |
Bisa11g1896 | 555 | Pfam | Ubiquitin family | 23 | 90 | IPR000626 | GO:0005515 | |
Bisa11g1896 | 555 | SUPERFAMILY | UBA-like | 509 | 551 | IPR009060 | GO:0005515 | |
Bisa11g1896 | 555 | Gene3D | - | 495 | 555 | - | - | |
Bisa11g1896 | 555 | SMART | CBM | 151 | 188 | IPR006636 | - | |
Bisa11g1896 | 555 | SMART | CBM | 370 | 410 | IPR006636 | - | |
Bisa11g1896 | 555 | SMART | CBM | 201 | 240 | IPR006636 | - | |
Bisa11g1896 | 555 | SMART | CBM | 414 | 449 | IPR006636 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa11g1896 | Bisa-ChrBisa11 | 41146658 | 41152146 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa11g1896 | 21 | 90 | Cytoplasmic Ribosomal Protein Gene Family | AT3G52590 | 31.429 | 9.47e-07 | 46.6 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa11g1896 | 11 | 41146658 | 41152146 | Bisa01g2915 | 01 | 60224075 | 60232042 | CCT | |
Bisa11g1896 | 11 | 41146658 | 41152146 | Bisa11g1896 | 11 | 41146658 | 41152146 | ECH |