LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g1895	ATGGTTACTTCCGATCAGAACAATCCTACCCTAATCAGACACACAAATTTCCAAGAAATGGGGATCAGAAAGTTTGGGAGCAACAGAAGAGCATTGAGCGTCATTAATCAGAGTCTAGTGGAGAATGCAGCCTACCCTTGCGTCGTTAACAAGAGAGGACTGTCAGATAAACATGAAATTTGTGAAAAGAAGCAGGCGAATCCAGTGCATCGACCGATCACCAGGAGGTTTGCTGCACAGATCGCCAGCACACAGCAATCTCGCACAGAGGAAATTAAGAAGTCCAACACCTCAAATTCAAACTGGAATGAATTTGGAGAAGCTATATTCGTTGATGATGAGCTCAAGTCACTCACAGATCAGCCAGAGCCGATGTCATTGGAGCAAACAGAACCGGTGGACAGTGAAGTGGATCAGATGGAGGAAGTTGAGATGGAAGATATAGCAGAAGAGCCTATGTTGGACATTGATTCTGGTGATGCCAATAATCCTCTTGCGGCTGTAGATTATATTGGAGAACTTTATGACTTCTACAGGAAAATGGAGAGTATTAGTTGTGTCTCACCAAATTATATGGCACAACAAGATGACATTAATGAAAGGATGAGGTCCATACTGATTGACTGGCTTATTGAGGTACACGATAAATTTGACCTCATGCATGAGACTCTATTTCTTACCATTAATGTCATAGATAGGTTTTTGGCGAAGAAAAACATGGTAAGAAAGAAACTTCAGTTGGTTGGCCTTGTTGCCATGCTTCTGGCATGCAAGTATGAGGAAGTTTCTGTACCTATAGTAGGGGATTTGATCCTCATATCCGACAAAGCATACACTAGGAAAGAAGTTCTGGAAATGGAGAAGTTGATTCTCAATACATTGCAGTTTAACATGTCAATTCCAACACCATATGTTTTTATGAGAAGATTCCTAAAGGCAGCTGAAGCAGATAAGAAACTTGAGGTACTAGCTTTCTTCATGATAGAGCTATCTCTTGTGGAATACGAGATGCTAAAGTTCCCACCATCAATGCTAGCTGCAGCTGCAGTCTATGCAGCTCAATGTACTACCTATGGCTTCAAACAATGGAGCAAGACATGTGAATGGCATACAAGCTACTCAGAAGATCAGCTATTAGTTTGCTCAAGAATGATGGTCGAGTTCCACAAAAAGGCCGGGACAGGGAAGCTTACGGCAGTATATAGGAAGTACTGCTCATCTAAGTTTGGCTATATTGCAAAAAGTGAACCAGCAAGTTTTCTTCTGGAGAACCAGTTGTAG	1281	0.4176	MVTSDQNNPTLIRHTNFQEMGIRKFGSNRRALSVINQSLVENAAYPCVVNKRGLSDKHEICEKKQANPVHRPITRRFAAQIASTQQSRTEEIKKSNTSNSNWNEFGEAIFVDDELKSLTDQPEPMSLEQTEPVDSEVDQMEEVEMEDIAEEPMLDIDSGDANNPLAAVDYIGELYDFYRKMESISCVSPNYMAQQDDINERMRSILIDWLIEVHDKFDLMHETLFLTINVIDRFLAKKNMVRKKLQLVGLVAMLLACKYEEVSVPIVGDLILISDKAYTRKEVLEMEKLILNTLQFNMSIPTPYVFMRRFLKAAEADKKLEVLAFFMIELSLVEYEMLKFPPSMLAAAAVYAAQCTTYGFKQWSKTCEWHTSYSEDQLLVCSRMMVEFHKKAGTGKLTAVYRKYCSSKFGYIAKSEPASFLLENQL	426

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g1895	426	PANTHER	CYCLINS	122	404	IPR039361	-
	Bisa11g1895	426	FunFam	G2/mitotic-specific cyclin	187	294	-	-
	Bisa11g1895	426	Gene3D	-	174	414	-	-
	Bisa11g1895	426	ProSitePatterns	Cyclins signature.	203	234	IPR006671	-
	Bisa11g1895	426	SMART	cyclin_7	208	292	IPR013763	-
	Bisa11g1895	426	SMART	cyclin_7	305	387	IPR013763	-
	Bisa11g1895	426	FunFam	G2/mitotic-specific cyclin-1	295	413	-	-
	Bisa11g1895	426	Pfam	Cyclin, C-terminal domain	301	417	IPR004367	-
	Bisa11g1895	426	SUPERFAMILY	Cyclin-like	162	298	IPR036915	-
	Bisa11g1895	426	PIRSF	Cyclin_A_B_D_E	4	426	IPR046965	GO:0016538\|GO:0044772

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g1895	Bisa-ChrBisa11	41082066	41085237	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g1895	1	422	Core Cell Cycle Gene Families	AT1G20610	60.046	0.0	514

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