Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1855 ATGTCTCCCTCAGTGGTATCGAAATTTGCCAACGCCTTTCGGACCTGGGTTGCCTGGACCCCACTCCTCCTGCCACCCCCTTGCCAACAGGTTTCCGATCTCCATTTTTCCTCTTCTTCTTCTTCTTCTTCTCTATTTAGTTTTGGGAGACTGAAAATTGCACTTGGCACGGAAAATAGTTCTTGGGGTACCATGGCTGACAATGGCTCCGGAAAGGAGGTCGTCTACCTTCATGGTGATTTGGACTTAAAAATCATTGAGGCCCGAGCGTTACCAAACATGGATGTTTTCTCCGAGCATTTACGCCGTTGCATCACCGGCTGTGACACTATCAAATTCGGTTCCGGCTCCACAGTTGGAGCCGACCGCAAAATCCACCGACACAAGAAGATCATTACCACTGACCCTTACGTGACAGTTACAGTCCCACAAGCTACTGTTGCCCGTACACGTGTCATAACGAATTCAACTAACCCTCGGTGGAACGAGCACTTCAACATCCCCTTGGCTCACCCTGTTGAGGATTTGGAATTTCGAGTGAAAGATGACGATGTCTTCGGCGCTCAGGTCGTCGGAACGGTTAAAATTCCTGCGCGGACGATTGCCACCGGTCAGCTTATCAGCGGGTGGTTCCAGATTGAAGGACCCTCCGTTAAGCCAAGCAGGCAAACCGAGCTTCATCTTGAAATGAAGTTCACACCAGTTGACGAGAACCCACTGTATCGTTGCGGCATTGCGAACGATCCCAAGCACCAGGGGGTGAGGCACTCGTATTTCCCGTTGCGGAAGGGAAGCTCCGTGAGACTGTACCAAGATGCCCATGTTCCTGAAGGGATGCTTCCTGAAATTAAGCTTGAGGGAGGGAAGATCTATGGGCATGGAAAATGTTGGGAAGATATTTGTTATGCTATATCCGAGGCTCATCATATGATATATCTCGTGGGTTGGTCGATCTACCACAAGGTGAAGCTGATTAGGGAGTCCTCCAGGCCGTTGCCACGAGGTGGAAATTTAACTCTTGGTGAATTGCTCAAATACAAGTCTCAAGAAGGAGTGCGAGTTCTGTTACTGGTTTGGGACGATAAAACTTCCCACGATAAGTTGCTCCTCAAGTCGGAAGGAGTAATGCAGACACATGATGAAGAAACCAGAAAGTTCTTTAAACATTCTTCTGTTATGTGCGTATTAGCACCTCGGTATGGTAGCGGCAAGTTGAGCATTATAAAGCAACAGGTTGTTGGAACTGTCTTCACACACCACCAAAAATGTGTTATTGTGGACACACAGGCTTCTGGTAATGATCGGAAGATAACTGCTTTTATAGGAGGACTCGATCTATGTGATGGTCGATATGACACACCTGAGCATCGACTTTTTCGTGATCTTGATACTGTTTTTTCGGGTGACTTCCACAATCCTACATTTCAAGCTGGAAAGAGGGCTCCAAGGGAACCATGGCATGATTGGCACTGCAGAATAGATGGGCCTGCTGCATATGATGTTCTTATTAATTTTGAGCAACGTTGGAGAAAAGCAACTAGGTGGAAGGAGTTTGCAATACTTTTCAAAAGGGCTTCTAATTGGCATGATGATGCATTACTAAGAATAGATCGCATCTCTTGGATATTAAGTCCTTCCTTGACTGTTTCAAAGGATGATCCTGATACCACAATGGTTCCCGGTGATGACCATACAGTATGGGTTTCCAAAGAAAATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCCCTGAAAGGGTTTCCCAGATTTGTTGATATTGCTCAGTCCCAGAATCTTATCTGTGCGAAGAATTTGGTAATAGATAAAAGCATTCAAACAGCATACATCCAGGCAATCAGATCTGCTCAACATTTTATTTATATAGAAAATCAATATTTTATTGGCTCATCATATGCATGGCCATCTTATGATAATGCAGGAGCTGATAATCTCATTCCAATGGAATTGGCACTAAAAATTGCTGGTAAAATCAGAGCTAAGGAAAGATTTGCTGTATATATAGTTTTACCAATGTGGCCAGAGGGTGATCCTAATTCCGGAGCTATGCAAGAAATTCTCTTTTGGCAGGGCCAGACAATGCAAATGATGTATTATGCTGTAGCTCAAGAATTGAAATCAATGCAATATACTGACTTGCATCCACAAGATTACCTGAACTTCTATTGTCTTGGTAACCGGGAGGAGATTCAAGAAAATAACTCGGCCTCAAATGGTGCTTCGGTCACCAGTTCATATAAGTATGGTCGATTCATGATTTATGTGCACGCAAAGGGGATGATCATTGATGATGAGTATGTGATATTGGGATCTGCTAATATAAACCAGAGATCTATGGCTGGTACAAAAGATACAGAGATAGCTATGGGTGCATATCAACCTCATCATACTTGGTCTGCAAGGAAAAGACATCCACGTGGCCAGATTTATGGTTACAGAATGTCACTGTGGAGTGAGCATCTTGGGGAGATAGAAACGTGTTTTGAGGAACCCGAGAGTCTGGATTGTGTCACTAAAGTGAATGCAATTGCTGGCGAAAATTGGAGAAAATTCACTTCTGAGAACTTCTCAAAGCTGCAGGGGCATTTGCTCAAGTATCCTATACAGGTAGATGCTAATGGGAAGGTGAGCTCCCTTCCTGGGCATGAGAATTTCCCTGATGTTGGCGGTAAAGTACTGGGGACTCCTTCCCCTACAATACCAGATATCTTAACTACGTAA 2757 0.4454 MSPSVVSKFANAFRTWVAWTPLLLPPPCQQVSDLHFSSSSSSSSLFSFGRLKIALGTENSSWGTMADNGSGKEVVYLHGDLDLKIIEARALPNMDVFSEHLRRCITGCDTIKFGSGSTVGADRKIHRHKKIITTDPYVTVTVPQATVARTRVITNSTNPRWNEHFNIPLAHPVEDLEFRVKDDDVFGAQVVGTVKIPARTIATGQLISGWFQIEGPSVKPSRQTELHLEMKFTPVDENPLYRCGIANDPKHQGVRHSYFPLRKGSSVRLYQDAHVPEGMLPEIKLEGGKIYGHGKCWEDICYAISEAHHMIYLVGWSIYHKVKLIRESSRPLPRGGNLTLGELLKYKSQEGVRVLLLVWDDKTSHDKLLLKSEGVMQTHDEETRKFFKHSSVMCVLAPRYGSGKLSIIKQQVVGTVFTHHQKCVIVDTQASGNDRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFQAGKRAPREPWHDWHCRIDGPAAYDVLINFEQRWRKATRWKEFAILFKRASNWHDDALLRIDRISWILSPSLTVSKDDPDTTMVPGDDHTVWVSKENDPENWHVQIFRSIDSGSLKGFPRFVDIAQSQNLICAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYDNAGADNLIPMELALKIAGKIRAKERFAVYIVLPMWPEGDPNSGAMQEILFWQGQTMQMMYYAVAQELKSMQYTDLHPQDYLNFYCLGNREEIQENNSASNGASVTSSYKYGRFMIYVHAKGMIIDDEYVILGSANINQRSMAGTKDTEIAMGAYQPHHTWSARKRHPRGQIYGYRMSLWSEHLGEIETCFEEPESLDCVTKVNAIAGENWRKFTSENFSKLQGHLLKYPIQVDANGKVSSLPGHENFPDVGGKVLGTPSPTIPDILTT 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1855 918 PIRSF PLD_plant 65 918 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bisa11g1855 918 Gene3D Endonuclease Chain A 287 532 - -
Bisa11g1855 918 ProSiteProfiles C2 domain profile. 61 211 IPR000008 -
Bisa11g1855 918 Pfam PLD-like domain 622 800 IPR025202 -
Bisa11g1855 918 Gene3D Endonuclease Chain A 592 814 - -
Bisa11g1855 918 Gene3D C2 domain 78 240 IPR035892 -
Bisa11g1855 918 PANTHER PHOSPHOLIPASE D 72 906 IPR015679 -
Bisa11g1855 918 SMART C2_3c 80 210 IPR000008 -
Bisa11g1855 918 CDD C2_plant_PLD 74 233 - -
Bisa11g1855 918 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 415 450 IPR001736 GO:0003824
Bisa11g1855 918 FunFam Phospholipase D delta 287 531 - -
Bisa11g1855 918 Pfam Phospholipase D Active site motif 415 450 IPR001736 GO:0003824
Bisa11g1855 918 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 763 790 IPR001736 GO:0003824
Bisa11g1855 918 SMART pld_4 415 450 IPR001736 GO:0003824
Bisa11g1855 918 SMART pld_4 763 790 IPR001736 GO:0003824
Bisa11g1855 918 Pfam C2 domain 79 213 IPR000008 -
Bisa11g1855 918 SUPERFAMILY Phospholipase D/nuclease 614 847 - -
Bisa11g1855 918 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 77 236 IPR035892 -
Bisa11g1855 918 SUPERFAMILY Phospholipase D/nuclease 256 519 - -
Bisa11g1855 918 Pfam Phospholipase D C terminal 838 907 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1855 Bisa-ChrBisa11 40602676 40609140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1855 65 754 Phospholipase D Gene Family (Wang group) AT4G35790 69.429 0.0 1024