LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g1847	ATGGTTGATCGGCACCGCCATTTGATGGCGGCTCCACCGCCGGAGTTAGCAAAACCACCTAATTCCAGAAATGGTAACACAAACACACTCGGTATGTTGGCGGCTTTTGTTTCAGGCATTTTAACAGTAATGGTACTTGCATTGTTGTACTGCCTCTTCGGGAGAAAGGTCATTCAACTTCTTAAGCGGAGAAGGGGTTTGACAGGTAAAGAAGATAGTAAGAGTTTGAAATATGACGAGGTATCATTGAGGCGTTTTGATTTGGAGGAACTAGAGAAGGCTACCGATAATTTTAGCCCAGATTGCTTGCTGGGTTCTGGTGCGTTTGGAACGGTGTACAAAGGAACCTTTGAATTTGAAGGAACATTAGCCATTAAGAGAGCACATGATGACTCATTCTTCAGTGTAGAAGAGTTCAGAAATGAAGTGAGGCTTATTTCGAAAGTAAAGCACAGGAATCTTGTTGGTCTGGTGGGATATTGTGAAGAACCTGGCGATGGGGTCAAAATGCTGGTCTATGAATATGTTCCTAATGGTTCTCTGCTGGATTACTTGATGGGAAAAGAAGGGAAGAGCTTAACTTGGACGCAAAGAGTAAACATAGCAATAGGAGCAGCTAAAGGCATAGCTTATTTGCATGAAGGGCTGAAGCCAAGCATAATCCATCGAGACATAAAACCAAGCAACGTTTTAATAGGAGACGGGTTTGAGGCTAAGGTTTCAGATTTCGGTTTGGTAAAATCAGGACCAAGTGGGGATCAATCCCATGTGAGCAGCCAAATCAAAGGAACACCAGGATATCTTGACCCTACCTATTGTTCAACCTTTCATTTGACCACTTTCAGTGATGTTTATAGCTTCGGTGTCATTCTCCTCCAACTTATTTCTGCAAGACCCGCTCTTGATTCTGCAGAAAACCAACATAATTCTCATATTATTGATTGGGCAAGGCCTAGCTTAGAGAAGGGAAACATTGAAGAAATTTTAGATGCAAATCTACTATCTGAGCCCTGCAATATGAAAGTTATGCTGAAAATTGGACAAATTGCTCTCAAATGTGGGGCTAAAGTACCAAAACGTCGTCCTACAATGACCCAGGTGTGTCAAGAGCTAGAAGCAGCCCTCTATTCAGCTGATAACTTTTCAATGGGTTTCAGAAGATCAGTAAGTTCTTCTCAGGAATCAACAGAATCAGAGCCTCTCAGATCAGTAGAGAACTATGATTATTCACGGAGTTTTGTGAGCATTGATGGGGTTGGGTTTCAGAAATTCCATATTGATATGGATAGCCTCTCCTTTCAGAGCACAAACTTAAGGTGCCCAGAAAATAATAGTATCAGTATTGACACTGATACGAACAGTTTGAGGAGAATTCAAGAGGATGAGCCTATGTAA	1395	0.4186	MVDRHRHLMAAPPPELAKPPNSRNGNTNTLGMLAAFVSGILTVMVLALLYCLFGRKVIQLLKRRRGLTGKEDSKSLKYDEVSLRRFDLEELEKATDNFSPDCLLGSGAFGTVYKGTFEFEGTLAIKRAHDDSFFSVEEFRNEVRLISKVKHRNLVGLVGYCEEPGDGVKMLVYEYVPNGSLLDYLMGKEGKSLTWTQRVNIAIGAAKGIAYLHEGLKPSIIHRDIKPSNVLIGDGFEAKVSDFGLVKSGPSGDQSHVSSQIKGTPGYLDPTYCSTFHLTTFSDVYSFGVILLQLISARPALDSAENQHNSHIIDWARPSLEKGNIEEILDANLLSEPCNMKVMLKIGQIALKCGAKVPKRRPTMTQVCQELEAALYSADNFSMGFRRSVSSSQESTESEPLRSVENYDYSRSFVSIDGVGFQKFHIDMDSLSFQSTNLRCPENNSISIDTDTNSLRRIQEDEPM	464

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g1847	464	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	67	175	-	-
	Bisa11g1847	464	CDD	STKc_IRAK	104	372	-	-
	Bisa11g1847	464	ProSiteProfiles	Protein kinase domain profile.	98	375	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa11g1847	464	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	18	391	-	-
	Bisa11g1847	464	ProSitePatterns	Protein kinases ATP-binding region signature.	104	126	IPR017441	GO:0005524
	Bisa11g1847	464	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	176	378	-	-
	Bisa11g1847	464	Pfam	Protein tyrosine and serine/threonine kinase	103	371	IPR001245	GO:0004672\|GO:0006468
	Bisa11g1847	464	MobiDBLite	consensus disorder prediction	1	24	-	-
	Bisa11g1847	464	SUPERFAMILY	Protein kinase-like (PK-like)	76	372	IPR011009	-
	Bisa11g1847	464	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	220	232	IPR008271	GO:0004672\|GO:0006468
	Bisa11g1847	464	Gene3D	Transferase(Phosphotransferase) domain 1	176	390	-	-
	Bisa11g1847	464	SMART	serkin_6	98	374	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa11g1847	464	Gene3D	Phosphorylase Kinase; domain 1	62	175	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g1847	Bisa-ChrBisa11	40452952	40455967	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g1847	84	384	Receptor kinase-like Gene Family	AT2G21480	44.186	8.13e-74	247

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Bisa11g1847		PK_Tyr_Ser-Thr	3.2e-41	CL0016