Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1835 ATGATCTTCATTCTCGTCTATTGCACTGCCAGAATCTCAGGAGGTCACATAAACCCTGCGGTGACATTGGGGCTACTGGTGGCGAGGAAGGTGTCGCTGGCAAGGGCAGTGACATACATGGGGTCACAGTGCGTGGGTGGTGTGTGTGGGGTGGCCCTAGTGAAGGCCTTGATGAAGGACCACTATAACAGGCTCGGTGGTGGAGCCAACGCCGTCGCACCAGGCTACTCCAAGGCCCATGCTTTGGGAGCTGAGATCATCGGTACTTTCGTCCTTGTTTACATTGTCTTCTCAGCCACTGATCCCAAAAGGAGAGCACATGACTGCCACGTTCCTGTGAGCATTACTATTTCCTCAAGCGAAGTAAGCATCTGGATGCGACGCATGCAGCCCATGCTAAAATTGAGTGATTTTGAATTGATGAAAAGTGAGTTAACTGGTTTTGGTATTGTCGGGGGTCTGGTTTTGGCTCCATTACCCATACCATTCCTATCACTGGCACTGGCATCAACCCTGCTAGGAGTTTTGGTGCTGCACGTGTCCACAACCATTCCAATGTCTGGGACGATCAGGTTTTGGATATTCTGGTTTGGACCCTTCACTGGGGCAATACTTGCAGCAGCATACCACCAAAACATACTGAGAGCTGGAGTTGCCAAGGCTTTGGGATCTTTCCGTAGCAATCACATCAACTAA 696 0.5043 MIFILVYCTARISGGHINPAVTLGLLVARKVSLARAVTYMGSQCVGGVCGVALVKALMKDHYNRLGGGANAVAPGYSKAHALGAEIIGTFVLVYIVFSATDPKRRAHDCHVPVSITISSSEVSIWMRRMQPMLKLSDFELMKSELTGFGIVGGLVLAPLPIPFLSLALASTLLGVLVLHVSTTIPMSGTIRFWIFWFGPFTGAILAAAYHQNILRAGVAKALGSFRSNHIN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1835 231 PRINTS Major intrinsic protein family signature 84 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1835 231 PRINTS Major intrinsic protein family signature 193 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1835 231 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1835 231 SUPERFAMILY Aquaporin-like 2 215 IPR023271 -
Bisa11g1835 231 Gene3D Glycerol uptake facilitator protein. 1 231 IPR023271 -
Bisa11g1835 231 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 218 IPR034294 -
Bisa11g1835 231 ProSitePatterns MIP family signature. 16 24 IPR022357 -
Bisa11g1835 231 Pfam Major intrinsic protein 1 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1835 Bisa-ChrBisa11 40330843 40336639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1835 1 231 Major Intrinsic Protein MIP AT4G35100 50.996 2.32e-70 215