LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g1817	ATGCGCAGAGAGCAAAAAACTCTCTTCACTTGCTTCGTTTTCCTCTTCCTCTTCCCGCCAAGAAACAGATCCTTGAAAATGGTGACCGTTGACGCAGAATATCTCAACCAAATCAAGAAGGCTCGTCGCGACCTTCGCGCTGTAATCGCCAGCGAGAACTGCGCTCCGCTCATGCTTCGTCTCGCGTTGCATGACGCTGGAACTTACGATCCTGCGAGTATTGTGAAAGGAGGTCCTAACGGTTCAATAAGAAGTGAGTTAGAGCTGAGACATAGGTTAAACCACGGTTTGAAAACAGCCCTGGACCTTTGCATAGAGATCACTGGGGGCCCAACAATTGAATTTATTCCCGGCAGAAGGGATTCGTTGTTCGTTCCAGAAGAAGGGCGGCTCCCGGATGACAGTCAAGAAACGTGGCAATTAAGGAACATATTTAATCGCATGGGTCTTAATGATAGAGACATCGTGGCCCTACGTGGAGGCTACAAAGCAGTGACTCGAAGCACTGAAGGCTGGGCAACAGAAAGGGACTATTTGACGTTTGACAACTCGTATTTTCGGGAATTACTGATGAGTGCAAATCTATTAGCAAATATTCCGAAAGCAGACTTGGCTCTACTGTATGATCAAAACTTCCGCAGCTATGTGAATCTTTATGCAGAGAATGAGGACAGTTTCTTTGCGGATTATGCTACTGCACACAAGAAAATGACAATGCTAGGATTCAGGCCACGTTATTACCTTCCCCGTGAGCCTGCTTCAAGGGATGGCGGACTGTTCATGGGTGTTGCTGTTGCTACAACAGTGGTGATGGTCATGGGTTTCTTCTTGAGTGAGATCCGCAGAAAGCCAGTGAACCTCAATAGCCGTTCTTGA	876	0.4726	MRREQKTLFTCFVFLFLFPPRNRSLKMVTVDAEYLNQIKKARRDLRAVIASENCAPLMLRLALHDAGTYDPASIVKGGPNGSIRSELELRHRLNHGLKTALDLCIEITGGPTIEFIPGRRDSLFVPEEGRLPDDSQETWQLRNIFNRMGLNDRDIVALRGGYKAVTRSTEGWATERDYLTFDNSYFRELLMSANLLANIPKADLALLYDQNFRSYVNLYAENEDSFFADYATAHKKMTMLGFRPRYYLPREPASRDGGLFMGVAVATTVVMVMGFFLSEIRRKPVNLNSRS	291

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g1817	291	Pfam	Peroxidase	105	222	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bisa11g1817	291	Gene3D	-	20	105	-	-
	Bisa11g1817	291	PRINTS	Plant ascorbate peroxidase signature	88	112	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Bisa11g1817	291	PRINTS	Plant ascorbate peroxidase signature	55	70	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Bisa11g1817	291	PRINTS	Plant ascorbate peroxidase signature	34	54	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Bisa11g1817	291	SUPERFAMILY	Heme-dependent peroxidases	34	243	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Bisa11g1817	291	PRINTS	Haem peroxidase superfamily signature	109	121	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bisa11g1817	291	PRINTS	Haem peroxidase superfamily signature	154	169	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bisa11g1817	291	PRINTS	Haem peroxidase superfamily signature	55	69	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bisa11g1817	291	PRINTS	Haem peroxidase superfamily signature	174	189	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g1817	Bisa-ChrBisa11	40062182	40064619	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g1817	105	243	Peroxidase	AT4G17690	26.966	5.26e-10	57.4

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