Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1817 ATGCGCAGAGAGCAAAAAACTCTCTTCACTTGCTTCGTTTTCCTCTTCCTCTTCCCGCCAAGAAACAGATCCTTGAAAATGGTGACCGTTGACGCAGAATATCTCAACCAAATCAAGAAGGCTCGTCGCGACCTTCGCGCTGTAATCGCCAGCGAGAACTGCGCTCCGCTCATGCTTCGTCTCGCGTTGCATGACGCTGGAACTTACGATCCTGCGAGTATTGTGAAAGGAGGTCCTAACGGTTCAATAAGAAGTGAGTTAGAGCTGAGACATAGGTTAAACCACGGTTTGAAAACAGCCCTGGACCTTTGCATAGAGATCACTGGGGGCCCAACAATTGAATTTATTCCCGGCAGAAGGGATTCGTTGTTCGTTCCAGAAGAAGGGCGGCTCCCGGATGACAGTCAAGAAACGTGGCAATTAAGGAACATATTTAATCGCATGGGTCTTAATGATAGAGACATCGTGGCCCTACGTGGAGGCTACAAAGCAGTGACTCGAAGCACTGAAGGCTGGGCAACAGAAAGGGACTATTTGACGTTTGACAACTCGTATTTTCGGGAATTACTGATGAGTGCAAATCTATTAGCAAATATTCCGAAAGCAGACTTGGCTCTACTGTATGATCAAAACTTCCGCAGCTATGTGAATCTTTATGCAGAGAATGAGGACAGTTTCTTTGCGGATTATGCTACTGCACACAAGAAAATGACAATGCTAGGATTCAGGCCACGTTATTACCTTCCCCGTGAGCCTGCTTCAAGGGATGGCGGACTGTTCATGGGTGTTGCTGTTGCTACAACAGTGGTGATGGTCATGGGTTTCTTCTTGAGTGAGATCCGCAGAAAGCCAGTGAACCTCAATAGCCGTTCTTGA 876 0.4726 MRREQKTLFTCFVFLFLFPPRNRSLKMVTVDAEYLNQIKKARRDLRAVIASENCAPLMLRLALHDAGTYDPASIVKGGPNGSIRSELELRHRLNHGLKTALDLCIEITGGPTIEFIPGRRDSLFVPEEGRLPDDSQETWQLRNIFNRMGLNDRDIVALRGGYKAVTRSTEGWATERDYLTFDNSYFRELLMSANLLANIPKADLALLYDQNFRSYVNLYAENEDSFFADYATAHKKMTMLGFRPRYYLPREPASRDGGLFMGVAVATTVVMVMGFFLSEIRRKPVNLNSRS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1817 291 Pfam Peroxidase 105 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 Gene3D - 20 105 - -
Bisa11g1817 291 PRINTS Plant ascorbate peroxidase signature 88 112 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 PRINTS Plant ascorbate peroxidase signature 55 70 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 PRINTS Plant ascorbate peroxidase signature 34 54 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 SUPERFAMILY Heme-dependent peroxidases 34 243 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 PRINTS Haem peroxidase superfamily signature 154 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 Gene3D - 106 241 - -
Bisa11g1817 291 ProSiteProfiles Plant heme peroxidase family profile. 97 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1817 291 Gene3D Peroxidase, domain 2 132 234 - -
Bisa11g1817 291 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 30 244 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1817 Bisa-ChrBisa11 40062182 40064619 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1817 105 243 Peroxidase AT4G17690 26.966 5.26e-10 57.4