Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1815 ATGGCGGCACCAAAACTTGACGCAGGATATCTCAAGGAAATCGACAAGGCTCGTCGCGATCTTCGTGCTCTAATCTACAGCAAGAATTGCGCTCCTCTCATGCTTCGTTTGGCGTGGCATGACGCTGGGACCTACGATGTTGAAACTGGAACAGGAGGTCCTAATGGTTCAATTAGAAATGAGCATGAGTTGAAACATAGCGCCAATAATGGTTTGAAAAAGGCCGTGGAATTTTGCGAGGAAGTGAAGGCCAATCATCCAAAAATCACATATGCCGACCTGTACCAGCTTGCTGGAGTTGTAGCAGTAGAGATCACTGGGGGTCCAACAATTGACTTCATTCCAGGCAGAAAGGATTCATTGATATCTCCAGAAGAAGGGCGGCTTCCAGATGCCAAACTAGGTGTATCACATTTAAGGGAGGTTTTTTATCGCATGGGACTGACTGATAAAGATATTGTGGCTCTTTCTGGAGGCCACACATTGGGTAAGGCACATCAAGAACGATCAAACTTTGAAGGCCAATGGACAAGAGATCCTAAGAAGTTCGATAATTCATATTTCAAGGAACTACTGAAAAGGGAGCCAAATGACTTGTTGAAGCTTCCCACAGACGAGGCTCTAGTGGAGGATCCTCAATTCCTCAAATATGTCGAGCTTTACGCAAAGGATGAGGATACTTTTTTCCAAGACTATGCGGTTTCGCACAGGAAATTATCAGAGCTAGGCTTTAATCCACCTTGGTCGATTAAAATGCTTTGGAGGTTGAAGATTCTTCTGTCAAAGATTATTCAGCTCTGA 801 0.4444 MAAPKLDAGYLKEIDKARRDLRALIYSKNCAPLMLRLAWHDAGTYDVETGTGGPNGSIRNEHELKHSANNGLKKAVEFCEEVKANHPKITYADLYQLAGVVAVEITGGPTIDFIPGRKDSLISPEEGRLPDAKLGVSHLREVFYRMGLTDKDIVALSGGHTLGKAHQERSNFEGQWTRDPKKFDNSYFKELLKREPNDLLKLPTDEALVEDPQFLKYVELYAKDEDTFFQDYAVSHRKLSELGFNPPWSIKMLWRLKILLSKIIQL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1815 266 ProSiteProfiles Plant heme peroxidase family profile. 31 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 FunFam L-ascorbate peroxidase, cytosolic 130 236 - -
Bisa11g1815 266 Gene3D - 17 243 - -
Bisa11g1815 266 CDD ascorbate_peroxidase 3 247 - -
Bisa11g1815 266 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 4 247 IPR044831 GO:0004601|GO:0034599
Bisa11g1815 266 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
Bisa11g1815 266 SUPERFAMILY Heme-dependent peroxidases 16 253 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 Gene3D Peroxidase, domain 2 130 236 - -
Bisa11g1815 266 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Bisa11g1815 266 Pfam Peroxidase 18 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 FunFam Cytosolic ascorbate peroxidase 17 137 - -
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 168 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa11g1815 266 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1815 Bisa-ChrBisa11 39962818 39965407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1815 89 243 Peroxidase AT4G17690 32.632 3.58e-19 83.6