Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1812 ATGGTGCCAACGTTCGGATTTGGCCAATTGGAAAGATGGGAGCGGCAAATGTGGAATGTGGTGCTTTTGGCTTCGGCTGAAGATAGAGGACAAACCTGTTCTACAAATTCTGTATATTCACCAGGTTCAAGCTCGCCAATGGGTAGCAAGTGCAGATTTGTGATTGATAGATTATGGGGTTTTGCCATTTCTTGCAAGAAAAGTAGCATACCACGTGCTCGACGAATTTGCCACAGAGATGTGGAGAAAGAAGAATTCCAGTATGCTAGTACTCAGTGCCTCTCCTCGTACTACAGTGTGTTTGTGGTTCGACTAGCAATTATGGTCATGCTAGCCATTTTGATTGGGCTGCTCACTATATTAACATGGCATTTCACAAAGATTTATACAGCAAAATCACTTGATAGCTTAGCATATGGCCTTCGTTATGAGCTACTACAACGCCCGATCTTACGGATGTGGAATATTTTGAACTCTACTGCTGAAATCACAACAGCTCAGGTTAAGCTGTCTGAGTATGTGATCAGACGGTACAACAACCCTGCCAATCAAGCAGAGCAAGTTGAGCAGCTGTATGAAGGAATGAAAGCTGTAACCTGGGCACTCTTTTCGAGTCGCAAGGCTCTCAATTCAATAACTATCAATTACAGGAACGGCTTTGTTCAAGCATTCCATAGAGATCTTAAGGGAAACAACACGTTTTACATCTATTCTGATCTAGCAAACTACTCCATAGGTGCCAGCGCCTCTAATGAGATCAACTCACTCTCAACACATCAAGCTTGGAACGATGAAGCCATTCATGGTAACAATTCTGCAATTTGGTATCGTGAACCACTCGATCCTATTAGCGGTGAGAAGATTGGAAAGGCTAAGCAGATTGCACCAGATGACTTGATTAATATTGCTGGCCTTTCTCAAGTGCCGGATGGGATAGCTTCGTGGCACGTTGCTGTGAGCAAGTTTACAGATTCACCATTGCTTTCTGCTGCACTGCCAGTTTGGGACTCTTCTAATAAGAGCATTGTAGCTGTTGTGGGTGTCACAACTGCACTTTATAGTGTTGGCCAGTTAATGAAAGAACTAGTTGAGTTTCATAGTGGTTATATCTATTTGACCTCCCAAGACGGTTACTTACTTGCCACTTCCACAAATGCTCCACTGCTAACAAATTCAACAAAGTCACTCAAGCTTAAGATGGCTGTTGATTGTGAAGATGATGTCATACGACAGGGAGCTCAGTGGTTGAAGAAAACCTATGGGAACAATTTCCCTCCAAGTCATGAGGTTCATGAAGAAAATGTAAAGCTAGGCTACCAGCAATATTACGTCGACTCGTTCTTTCTAAATTTGAAGAGACTTCCTCTGGTGGGTGTCATCATTATACCGAGAAAGTATATCATGGGGAAGGTAGATGAAAGAGCCTTCAAAACGTTGGTGATTCTGATATCTGCATCCTTGTGCATTCTAGTTATTGGATGTGTCTGTATTTTGATACTGACAAATGGGGTATCAAAGGAAATGAAACTAAGAGCAGAACTAATCAGTCATCTGGAAGCAAGAAGAAAGGCAGAGGCATCAAGCAACTATAAAAGTCAGTTTCTGGCAAACATGAGTCACGAACTGAGGACACCTATGGCAGCAGTGATTGGGTTGCTCGACATTCTTATATCTGATGACTGTCTCACAAATGAACAATATGCAACAGTTACTCAGATAAGAAAATGCTCAACTGCCTTACTCCGTCTTCTTAACAACATCCTGGACCTGAGCAAGGTGGAATCTGGAAAATTGGTGTTAGAAGAGGCAGAATTCGACTTAGGACGGGAACTTGAAGGGCTTGTTGATATGTTTTCTGTGCAGTGCATTAACCACAATGTAGAGCTTATTTTGGACCTGTCTGATGATATGCCAAAGGTAGTTCGGGGTGACTCTGCTAGGGTAGTTCAAATATTTGCAAATTTGATCAACAATTCAATTAAGTTTACTCCATCGGGTCACATTATTCTGCGAGGATGGTGCGAGACCCCAAATATGTGCAGTGATAGTGCAAATCTTCCTCTCAATCAGAAGAAGTCATGGACTCCACAAAAGGTCAAAATGAAGCAACATGAAATTCATGCAAAGAAGACATCCAAGAAAGATAAAATGATTCTTTGGTTTGAATTAGAAGACACAGGATGTGGTATTGATCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAACAAGCAGATCCATCAACTACTAGACTGCATGGAGGCACTGGTCTTGGACTTTGCATTGTGAGAACCTTGGTTAATAAGATGGGCGGAGAAATCAAGGTTATCAAAAAGGAGAGTCCAGGAACTCTGATGCGATTATACCTCCAGCTAAGTACACCCACGGCTGCCACTGAACAACATTATCAAGTGGATTATGCAGAGAATGGCTTAGTGGTATTGCTTGCATTACATGGCAACATGGGTCGATCAATCACATTTAAGTGGTTAGAGAAAAATGGGGTGTGCTCTCTGGAGGCATCTGAATGGAATGGGCTGACACAACTTCTAAGGGAACTCTTCCAAGCAAGAAGTTCAGTTCAAAATATTGGCTTTGAAGCACACTATGGAGTAAATGAGAGTTTGAAGTCCAAGTTACTCAACATAGAAGAAATGAGGAACCCAGCATTTGTCATTGTTGTTGACATAGGACTACTTGATTTGAGCACAGATATATGGAAGGAACAGCTTAACTTCCTCCAGAAGTACTTTGGCAGGGCGAAGTTCGCATGGGTGCTAAATCACGACACCTCCAATACCATAAAGATGGAGCTTCGCCGGAAGGGACATATATTGATGGTCAACAAACCCCTCTACAAAGCAAAAATAATTCATATTTTGGAAGTTGTCATAAAGGAGAGAAATCTCGAGCTACAAAAGAAAAGTATCACTGCTTCGAGAGGCGCAATGAAAGAGGGTGATGTGCACGAGTATCTTGAGATTGATTCTACTCATTTTGATGCTGCTAGCTCTGATGGTTCTGACATATCTGAAATGGGTGGTTCTTATAGTGCCGGTGGAGATAAACAACGGGAAATGATTGTAAAATTCCATCCATCATCACAATACCAGATAAAAAGCTGCTTAGTTGGATTGACCAATGGATTTTCAGAAGATAACATTTCAAGGAAAGAAGATTCATATCAGAGCAGCCCCAACTCCCATGGTGCCCTTGAAAATGCAGAACCAAAACTACAGTCCCCGCAACAAGCGTCCTTTCCAACAGAAACTCAAGGTAAAGACTCTAAAGGTGGAGAAACAAATAGAGTCACTTGCTCAAGTAAAGCCGGCAATGGACAGAAATCTCTCGAAGGCCTGAGGATATTGCTTGCAGAAGACAATCCAGTACTTCAAAGGGTTGCAAGCATAATGCTGGAAAAAATGGGAGCTACAGTTATTGCAGTAGGTGATGGACAACAGGCAGTGGATGCTCTGAATTGTAAGCTCGGTGAAGACAGTGGAAGATCTCAAACAGAAATTCTCAGTTGCTCCCCATATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTATGAAGCAACAAAAGCAATCAGGAAATCGGAAGAAGGGACTAGCTTGCACATTCCAATTGTTGCTCTCACAGCCCATGCAATGTCATCTGATGAAGCTAAGTGCCTGGAGGTGGGCATGGATGCTTATTTAACAAAGCCTATTGACTTCAAGCTGATGATGTCCACCATTCTTTCACTCACTAAGACAACATCCTGA 3780 0.4214 MVPTFGFGQLERWERQMWNVVLLASAEDRGQTCSTNSVYSPGSSSPMGSKCRFVIDRLWGFAISCKKSSIPRARRICHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTAKSLDSLAYGLRYELLQRPILRMWNILNSTAEITTAQVKLSEYVIRRYNNPANQAEQVEQLYEGMKAVTWALFSSRKALNSITINYRNGFVQAFHRDLKGNNTFYIYSDLANYSIGASASNEINSLSTHQAWNDEAIHGNNSAIWYREPLDPISGEKIGKAKQIAPDDLINIAGLSQVPDGIASWHVAVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVEFHSGYIYLTSQDGYLLATSTNAPLLTNSTKSLKLKMAVDCEDDVIRQGAQWLKKTYGNNFPPSHEVHEENVKLGYQQYYVDSFFLNLKRLPLVGVIIIPRKYIMGKVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVELILDLSDDMPKVVRGDSARVVQIFANLINNSIKFTPSGHIILRGWCETPNMCSDSANLPLNQKKSWTPQKVKMKQHEIHAKKTSKKDKMILWFELEDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGEIKVIKKESPGTLMRLYLQLSTPTAATEQHYQVDYAENGLVVLLALHGNMGRSITFKWLEKNGVCSLEASEWNGLTQLLRELFQARSSVQNIGFEAHYGVNESLKSKLLNIEEMRNPAFVIVVDIGLLDLSTDIWKEQLNFLQKYFGRAKFAWVLNHDTSNTIKMELRRKGHILMVNKPLYKAKIIHILEVVIKERNLELQKKSITASRGAMKEGDVHEYLEIDSTHFDAASSDGSDISEMGGSYSAGGDKQREMIVKFHPSSQYQIKSCLVGLTNGFSEDNISRKEDSYQSSPNSHGALENAEPKLQSPQQASFPTETQGKDSKGGETNRVTCSSKAGNGQKSLEGLRILLAEDNPVLQRVASIMLEKMGATVIAVGDGQQAVDALNCKLGEDSGRSQTEILSCSPYDLILMDCQMPKMDGYEATKAIRKSEEGTSLHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDFKLMMSTILSLTKTTS 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1812 1259 SUPERFAMILY CheY-like 1118 1255 IPR011006 -
Bisa11g1812 1259 ProSiteProfiles Response regulatory domain profile. 1121 1255 IPR001789 GO:0000160
Bisa11g1812 1259 CDD HisKA 531 592 IPR003661 GO:0000155|GO:0007165
Bisa11g1812 1259 SMART REC_2 1120 1251 IPR001789 GO:0000160
Bisa11g1812 1259 FunFam Histidine kinase 1-like protein 518 597 - -
Bisa11g1812 1259 MobiDBLite consensus disorder prediction 1077 1110 - -
Bisa11g1812 1259 PANTHER TWO-COMPONENT HISTIDINE KINASE 88 798 - -
Bisa11g1812 1259 SMART HisKA_10 530 596 IPR003661 GO:0000155|GO:0007165
Bisa11g1812 1259 SMART HKATPase_4 643 794 IPR003594 -
Bisa11g1812 1259 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 585 791 IPR036890 -
Bisa11g1812 1259 MobiDBLite consensus disorder prediction 1056 1110 - -
Bisa11g1812 1259 Pfam His Kinase A (phospho-acceptor) domain 531 596 IPR003661 GO:0000155|GO:0007165
Bisa11g1812 1259 Pfam Response regulator receiver domain 1122 1250 IPR001789 GO:0000160
Bisa11g1812 1259 Gene3D PAS domain 327 474 - -
Bisa11g1812 1259 Gene3D - 1101 1256 - -
Bisa11g1812 1259 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 643 793 IPR003594 -
Bisa11g1812 1259 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 517 597 IPR036097 GO:0000155|GO:0007165
Bisa11g1812 1259 PRINTS Bacterial sensor protein C-terminal signature 737 747 IPR004358 GO:0016310|GO:0016772
Bisa11g1812 1259 PRINTS Bacterial sensor protein C-terminal signature 754 772 IPR004358 GO:0016310|GO:0016772
Bisa11g1812 1259 PRINTS Bacterial sensor protein C-terminal signature 719 733 IPR004358 GO:0016310|GO:0016772
Bisa11g1812 1259 CDD REC_hyHK_CKI1_RcsC-like 1122 1251 - -
Bisa11g1812 1259 Gene3D - 518 597 - -
Bisa11g1812 1259 Gene3D - 598 796 IPR036890 -
Bisa11g1812 1259 ProSiteProfiles Histidine kinase domain profile. 537 794 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1812 Bisa-ChrBisa11 39913870 39920626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1812 45 1259 Histidine Kinase Gene Family AT2G17820 64.384 0.0 1578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa11g1812 HATPase_c 1.3e-22 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1812 11 39913870 39920626 Bisa11g1812 11 39913870 39920626 ECH