Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1794 ATGCAACTTATGTGTATGAGAAATTCAGAAAAAATAGGAAAAGTTGAAAACTTGTGTGAAATGGATCAGTGGAAACCTGAAGATTTGTCGAAATCTGTGTCTGTTGCGGCAGATTTAGCTCCATCTTCGCTTCAGCCTCAGTCTCAGCTTGTTACTGTCACGTCTAATCGCTTGCAGAACTCGCATGCCGAATCCAGGCAGAGGCCTGAAGCTGTAGCGCAGGATCCAGTTGCTGCAAGAAAACTTCAGAAGGCAGACCGCGAGAAACTAAGGAGGGATCGACTAAATGAGCATTTCCTTGAGCTGGGAAACACGTTAGACCCTGATAGGCCAAAGAATGACAAGGGAACCATCCTTACGGACACAATCCAAGTGCTAAAGGATTTAACTGCTGAAGTCAATAGACTAAAAGCTGAGCACGCAGCACTTTCTGAAGAATCCCATGAAATAATGGAAGAGAAGAATGAACTCAGAGAAGAGAAGACGTCTCTAAAATCTGATATCGAAAATCTCAATGCCCAGTATCAGCAGAAAGTTAGAGTCATGTTCCCATGGACTGCCATTGACCATTCGGTTGTCATGGCTCCACCTTATTCGTATCCGGTTCCAATACCCATCCCTCCCGGTCCAATTTCCATTCATCCATCAATTCAGTCTTTTCCCTTCTTTGGAAATCAAACTTCTGGCCCAATTCCTAATTCCTGTTCCACATATGTCCAGTTTTCAGCTCCAGCTAATCCCCCCGCCGAGCAACCAACAGGCCAGTATGCTTCCACGTCTCATGTTTCAAGCAAACAAGAATCCAGAAGTAAGTCGCCAGATCATGAAAGGCCGAGCAATGCTGAAAGATGTGGCGAGTCTAATGATGTGGCTACAGAACTGGAACTTAAGATGCCTGGATCATCGACACGACAGGAATCCTCCTCTGGAGGAAGGAAGGTCAAGCATTCGACGAGCAAGGAGAGAAGTATCATAGATGGAAGTGCTTCAAGCAGGCATTCTTCTTCTCAAGGACTTAAAGATAGCTCCAACAGTGTGTGTCACATCCCTAAGGCTGATGAATGA 1065 0.4535 MQLMCMRNSEKIGKVENLCEMDQWKPEDLSKSVSVAADLAPSSLQPQSQLVTVTSNRLQNSHAESRQRPEAVAQDPVAARKLQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKGTILTDTIQVLKDLTAEVNRLKAEHAALSEESHEIMEEKNELREEKTSLKSDIENLNAQYQQKVRVMFPWTAIDHSVVMAPPYSYPVPIPIPPGPISIHPSIQSFPFFGNQTSGPIPNSCSTYVQFSAPANPPAEQPTGQYASTSHVSSKQESRSKSPDHERPSNAERCGESNDVATELELKMPGSSTRQESSSGGRKVKHSTSKERSIIDGSASSRHSSSQGLKDSSNSVCHIPKADE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1794 354 MobiDBLite consensus disorder prediction 242 354 - -
Bisa11g1794 354 MobiDBLite consensus disorder prediction 53 67 - -
Bisa11g1794 354 MobiDBLite consensus disorder prediction 323 344 - -
Bisa11g1794 354 CDD bHLH_AtILR3_like 84 158 - -
Bisa11g1794 354 MobiDBLite consensus disorder prediction 242 266 - -
Bisa11g1794 354 Pfam Helix-loop-helix DNA-binding domain 80 129 IPR011598 GO:0046983
Bisa11g1794 354 MobiDBLite consensus disorder prediction 53 90 - -
Bisa11g1794 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 148 IPR036638 GO:0046983
Bisa11g1794 354 PANTHER TRANSCRIPTION FACTOR BHLH121 45 351 IPR044579 GO:0003700|GO:0006879
Bisa11g1794 354 SMART finulus 85 135 IPR011598 GO:0046983
Bisa11g1794 354 MobiDBLite consensus disorder prediction 267 283 - -
Bisa11g1794 354 Coils Coil 119 174 - -
Bisa11g1794 354 Gene3D - 78 155 IPR036638 GO:0046983
Bisa11g1794 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 129 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1794 Bisa-ChrBisa11 39719921 39723699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1794 77 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 54.508 1.45e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g1794 HLH 2.4e-08 No_clan