Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1792 ATGGGCATTTGCTTCTCTTCCACAAAGGTAAGTGGCTCCAACAGCAATTCCACGGCTGCCGGCGCCACCACTACCGCCAACCACAACCGTAAGGCGAGTGCGAAGCCTCAATCACGCGCGACGCCGTTTAAGGCTCAGGCGTCGAACGATCAGAGGCCAAAAGCGCCAAATGAGAACGGCAACACTCAGCCAAAGAGGAATCCCCAGCAGCAAAAGCCCAAGGACAAGCAGACTTCCAAGCACGAACCGTGCGGGAAACGCACCGATTTCGGCTATGACAAGGATTTTGATGCGCGATACTTGGTCGGAAAATTGTTAGGACATGGGCAATTTGGTTACACATATGTTGGAGTGGATAAAGCAAATGGGGATCGAGTGGCGGTGAAGAAAATTGACAAGAGCAAGATGCTTCTCCCAATTGCTGTTGAGGATGTTAAGCGAGAGGTCAAGATATTGAAAGAACTCACAGGCCACGAGAATGTGGTTCAGTTCTATAACGCTTTTGAGGATGATTCATATGTGTACATAGTTATGGAGTTATGCGAGGGAGGAGAACTGTTAGATCGGATATTGGCTAAGAAGAACAGCCGCTACACTGAAAAAGATGCAGCAGTGGTTGTAAGGCAGATGCTTAAAGTTGCAGCTGAGTGTCATTTACATGGTTTGGTACACCGGGACATGAAACCTGAAAATTTTCTTTTTAAATCAACCAGAGAAGATTCACATTTAAAGGCTACAGATTTTGGTTTGTCTGATTTTATTAAACCTGGTAAGATGTTTCGCGATATTGTAGGCAGTGCTTACTATGTTGCACCTGAAGTGTTGAAGCGCAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTAATTACATACATATTGCTTAGTGGGAGGCGCCCTTTTTGGGATAAAACTGAGGATGGTATCTTCAAAGAGGTCTTACGGCACACACCTGATTTCCAGCGGAAACCATGGCCATCTATAAGTGATGCTGCAAAAGAATTTGTGAAGAAATTGCTAGTAAAGGATCCTCGGGCAAGATTAACTGCTGCTCAGGCTCTATCTCATCCATGGGTTAGAGAAGGAGGAGAGGCATTAGAGATTCCTATTGATATATCTGTCCTAAGCAACATGCGGAAGTTTGTAAAATTTAGTAGATTAAAACAATTTGCACTCAGGGCACTGGCTAGCACACTTAACGAAGAAGAGTTGGCAGATCTCAGAGATCAATTTGATGCAATAGATGTGGACAAAAATGGTGTTATTAGTCTAGAAGAGATGCGAGAGGCTCTTGCTAAGGATATCCCTTGGAAGTTAAAAGATTCCCGTGTTATTGAGATATTACAAGCGATTGACAGCAACACAGATGGGCTTGTCGATTACTCAGAGTTTGTGGCTGCTACACTTCATGTGCGTCAATTGGAGGAACATGACTCAGAGAAGTGGCAGCTACGGTCACAAGCTGCTTTTGAGAAATTCGATCTAGACAAGGATGGCTATATTACTCCAGAAGAACTTAGAATGCATACGGGCTTAAGGGGTTCCATTGACCCGCTGCTTGAGGAAGCTGATATTGACAAAGATGGAAAAATCAGCTTACCAGAATTCCGTAGACTTCTAAGAACTGCAAGCGCAGTTCACGAATCGTGA 1653 0.4453 MGICFSSTKVSGSNSNSTAAGATTTANHNRKASAKPQSRATPFKAQASNDQRPKAPNENGNTQPKRNPQQQKPKDKQTSKHEPCGKRTDFGYDKDFDARYLVGKLLGHGQFGYTYVGVDKANGDRVAVKKIDKSKMLLPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKNSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTREDSHLKATDFGLSDFIKPGKMFRDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLSGRRPFWDKTEDGIFKEVLRHTPDFQRKPWPSISDAAKEFVKKLLVKDPRARLTAAQALSHPWVREGGEALEIPIDISVLSNMRKFVKFSRLKQFALRALASTLNEEELADLRDQFDAIDVDKNGVISLEEMREALAKDIPWKLKDSRVIEILQAIDSNTDGLVDYSEFVAATLHVRQLEEHDSEKWQLRSQAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLEEADIDKDGKISLPEFRRLLRTASAVHES 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1792 550 ProSitePatterns Protein kinases ATP-binding region signature. 106 130 IPR017441 GO:0005524
Bisa11g1792 550 ProSiteProfiles EF-hand calcium-binding domain profile. 482 517 IPR002048 GO:0005509
Bisa11g1792 550 MobiDBLite consensus disorder prediction 1 88 - -
Bisa11g1792 550 ProSiteProfiles EF-hand calcium-binding domain profile. 440 475 IPR002048 GO:0005509
Bisa11g1792 550 FunFam calcium-dependent protein kinase 28-like 186 379 - -
Bisa11g1792 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 77 529 - -
Bisa11g1792 550 MobiDBLite consensus disorder prediction 1 68 - -
Bisa11g1792 550 FunFam CDPK-related kinase 1 93 185 - -
Bisa11g1792 550 Gene3D Transferase(Phosphotransferase) domain 1 186 379 - -
Bisa11g1792 550 Gene3D - 380 540 - -
Bisa11g1792 550 Pfam EF-hand domain pair 407 469 IPR002048 GO:0005509
Bisa11g1792 550 Pfam EF-hand domain pair 489 541 IPR002048 GO:0005509
Bisa11g1792 550 Gene3D Phosphorylase Kinase; domain 1 93 185 - -
Bisa11g1792 550 MobiDBLite consensus disorder prediction 69 88 - -
Bisa11g1792 550 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Bisa11g1792 550 SMART serkin_6 100 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1792 550 Pfam Protein kinase domain 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1792 550 SUPERFAMILY EF-hand 392 543 IPR011992 -
Bisa11g1792 550 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
Bisa11g1792 550 ProSiteProfiles Protein kinase domain profile. 100 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1792 550 CDD STKc_CAMK 99 359 - -
Bisa11g1792 550 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
Bisa11g1792 550 Gene3D - 401 470 - -
Bisa11g1792 550 FunFam Calcium-dependent protein kinase 28 401 470 - -
Bisa11g1792 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Bisa11g1792 550 SMART efh_1 407 435 IPR002048 GO:0005509
Bisa11g1792 550 SMART efh_1 486 514 IPR002048 GO:0005509
Bisa11g1792 550 SMART efh_1 444 472 IPR002048 GO:0005509
Bisa11g1792 550 SMART efh_1 516 544 IPR002048 GO:0005509
Bisa11g1792 550 ProSiteProfiles EF-hand calcium-binding domain profile. 403 438 IPR002048 GO:0005509
Bisa11g1792 550 CDD EFh 488 542 IPR002048 GO:0005509
Bisa11g1792 550 SUPERFAMILY Protein kinase-like (PK-like) 94 380 IPR011009 -
Bisa11g1792 550 ProSitePatterns EF-hand calcium-binding domain. 525 537 IPR018247 -
Bisa11g1792 550 ProSiteProfiles EF-hand calcium-binding domain profile. 520 547 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1792 Bisa-ChrBisa11 39714800 39719066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1792 1 545 EF-hand Containing Proteins AT2G17890 73.776 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa11g1792 Pkinase 1.2e-68 CL0016