Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1787 ATGGACCCTCAACAACAACAACAACAACCACAAGGAGCAGGAAACGAGGAAGGCGGAGGGAGTGGGAAGGGAGGGTATATGTGCAGGCAAAGCAGTACGAGGTGGACTCCCACAAGCGACCAGATTAGGATTCTGAAGGAGCTTTACTACAACAATGGAGTTAGGTCCCCCAATGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTTAGGCAGTACGGCAAGATTGAAGGCAAGAACGTCTTTTACTGGTTCCAGAACCACAAGGCTCGTGAACGCCAGAAGAAACGCTTCACTTCCTCCTCAGATAATAACCTCCCCATGCAATTCCAATCTCGAACTCCCTCCACCACTAACATTCCTCCTCCTGCTTGGAAGCCTGATCAAGAACCCATCCTTCACGCCAAGTATTCTAACATTCCATCTTCTGCCGGTGTTTCTTCTGCATCATCTTCTACTACTGCTGGCATGGTTGCTCTGGGCCAGATGGGGAACTATGGGTATGGATCTGTCACCATGGAGAAGTGTTTTAGGGACTGCTCAATATCAGCAGGAGGAAGCAGTGGTGGCGGAACCATAAGCCACAATTTTGGATGGGTGGGTGTGGATCCATACTCCTCAAACTACACCAATTTCTTAGAGAAAATAATGCCAAGTGATCAAGAAACCCTGAAAGAAGAGCAAGAAGATGAAGAAGGAGCCCCTGAGATTGAAACCCTGCCTCTGTTCCCCATGCACGGCGAGGACATCCATGGCTACTGCAACCTCAAGTCTGATTCTTCTTACTATGGCGGTGCCTGGTATCATCATGAAGATCATGGCTTCAACAACAAACCTTATCGTCATCGTACTTCCCTCGAGCTCACTCTGAATTCCTACAGTCGCACATCTCCAGATTCAGCTTCTTAA 906 0.4857 MDPQQQQQQPQGAGNEEGGGSGKGGYMCRQSSTRWTPTSDQIRILKELYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSSDNNLPMQFQSRTPSTTNIPPPAWKPDQEPILHAKYSNIPSSAGVSSASSSTTAGMVALGQMGNYGYGSVTMEKCFRDCSISAGGSSGGGTISHNFGWVGVDPYSSNYTNFLEKIMPSDQETLKEEQEDEEGAPEIETLPLFPMHGEDIHGYCNLKSDSSYYGGAWYHHEDHGFNNKPYRHRTSLELTLNSYSRTSPDSAS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1787 301 MobiDBLite consensus disorder prediction 1 37 - -
Bisa11g1787 301 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 14 293 IPR044555 GO:0003700|GO:0099402
Bisa11g1787 301 MobiDBLite consensus disorder prediction 94 128 - -
Bisa11g1787 301 MobiDBLite consensus disorder prediction 1 15 - -
Bisa11g1787 301 Gene3D - 32 98 - -
Bisa11g1787 301 MobiDBLite consensus disorder prediction 99 118 - -
Bisa11g1787 301 SMART HOX_1 30 98 IPR001356 GO:0003677
Bisa11g1787 301 CDD homeodomain 33 95 IPR001356 GO:0003677
Bisa11g1787 301 Pfam Homeodomain 32 93 IPR001356 GO:0003677
Bisa11g1787 301 SUPERFAMILY Homeodomain-like 25 97 IPR009057 -
Bisa11g1787 301 ProSiteProfiles 'Homeobox' domain profile. 28 94 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1787 Bisa-ChrBisa11 39651668 39653034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1787 26 248 Wox Gene Family AT2G17950 44.141 2.78e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bisa11g1787 Homeodomain 1e-17 CL0123