Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1771 ATGGAGTCATGCGTCCCACCAGGGTTTCGGTTCCACCCTACTGATGAAGAGCTCGTTGGGTATTATCTCAGGAAGAAAGTTGCTTCTCAGAAGATCGATCTTGATGTTATCCGAGAGATCGATCTGTATCGTATTGAACCCTGGGATCTCCAAGAGAGATGCAAGATCGGGTATGAGGAGCAAAACGAGTGGTATTTCTTTAGCCACAAAGACAAGAAGTATCCAACGGGGACGAGGACGAACAGAGCAACCATGGCAGGGTTCTGGAAGGCAACAGGAAGAGACAAGGCAGTGTACGACAAGGCCAAGCTCATAGGTATGAGGAAGACCCTTGTCTTCTACAAAGGAAGAGCCCCTAATGGCCAGAAAACTGACTGGATCATGCACGAGTATCGCCTTGAATCTGACGACAATGCCCCTCCTCAGGCAAGAAGAAGGATGGGTTGTTTGCAGAGCATTCAAGAAAAGAAGCAATGGGCAAACGAAGAGCATAGAAGGATGGGACTCTTGTTACTTGTACGAGGAGACAAGTGGGGTAAGCTCAGTGGTGGATCCAATAGATCTCATAATCTCAAGGCAGCCTCAGGCTCAGGGTTTCTTAGCTCCAAGTTTCATGTGGCTCTTGATAAATTTGTGGCTTCCCAGTTGAATCAAGGTCAAGAGAGGCATGAAAGTAGTGAAAATGAGGGAGTGTCAATGTCAAGCTTTGAAACACACGAGGCATTGCTGCTACTGCAGACTAGTGGTGGTAGGGATGAAGAGAACAAGCTAAGCTCGTTTTTGAATGGAGGCTCAGACTGTGACATTGGGATATGCGTGTTTGAGAAATGA 831 0.4717 MESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCKIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDDNAPPQARRRMGCLQSIQEKKQWANEEHRRMGLLLLVRGDKWGKLSGGSNRSHNLKAASGSGFLSSKFHVALDKFVASQLNQGQERHESSENEGVSMSSFETHEALLLLQTSGGRDEENKLSSFLNGGSDCDIGICVFEK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1771 276 FunFam Nac domain-containing protein 86 14 158 - -
Bisa11g1771 276 Gene3D NAC domain 14 162 IPR036093 GO:0003677|GO:0006355
Bisa11g1771 276 Pfam No apical meristem (NAM) protein 6 133 IPR003441 GO:0003677|GO:0006355
Bisa11g1771 276 ProSiteProfiles NAC domain profile. 5 156 IPR003441 GO:0003677|GO:0006355
Bisa11g1771 276 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 185 - -
Bisa11g1771 276 SUPERFAMILY NAC domain 3 139 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1771 Bisa-ChrBisa11 39425630 39427771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1771 208 275 NAC Transcription Factor Family AT2G18060 41.333 5.34e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa11g1771 NAM 1.8e-38 No_clan