Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1769 ATGCCTCCTCTTTTCTTTCTTATGGTGCTCTGTGCACCGTTCTTAACTTGCGCCGAGAGAAGTGGCGTCGCCATTGCTGAGATCGCCGCTTTGACTGCCTTCAAGCTCAATCTTCAGGATCCTCTCGGGGCGCTCAGCGGCTGGGATCCTTCCTCGCCGGCGGCTCCTTGCGACTGGCGTGGCGTTGCCTGTACGAACAACCGAGTCACTGAGCTGCGCTTGCCTCGGCTTCAACTCAGTGGCCGGCTCACTGACCGGATTTCTGATTTGCGCATGTTGCGGAAGCTGAGCCTTCGGTCGAACTCCTTCAACGGAACCATTCCTTCGTCGCTTGCCAAATGCACGTTCCTACGGGCGGTGTTTCTGCAGTACAACTCACTCTCCGGGAATCTTCCGCCGGAGATAGGAAACGTCACTGGTCTTCAGATTCTTAATGTCGCGCAAAACCATCTCTCCGGCAGAATGCCCGGTGATCTCCCACTGAGACTGAAGTACGTCGATCTCTCGTCGAACTCATTTTCCGGCGAGATTCCGAGTACCATTACCAATCTTTCTCAGCTTCAGCTGATCAATCTATCGTACAACCAGTTCTCAGGCGAGATTCCGGCGAGCTTTGGAGAGCTTCAGCAGCTCGAATACCTCTGGCTTGACCACAATCTTCTAGGAGGAACTCTGCCTTCGGCACTCGCTAACTGCTCTTCGCTAGTGCATCTGAGCGTAGAAGGAAATGCACTTGGAGGAGTAATTCCGGCGGCCATTGCAGCTCTTCCGAAGCTTCAGGTGATATCCCTCTCGCAGAATAATCTCACTGGTTCAATTCCGGCTTCTATTTTCTGCAACATTTCGGTCTACGCGCCGTCACTTCGAATCGTTCAACTAGGATTTAATACTTTCACGGATATTGTTGAGCCTGAGTCAACAACGTGTTTCAGTGTTGTTCAGGTTTTGGATATTCAGCATAATAGCATACACGGCAGGTTTCCACTATGGATAACGAATTTGTCCACCTTAACAGTGCTTTATGTTTCCAGTAATGCATTTTCTGGTACTATTCCGCCAGAAATAGGAAACCTCGCGAGATTGGAGGAGTTAAAGATGGCCAACAATTCATTTACTGGGATGATTGCAGAGGAAATCAAGAAATGTGCATCCCTTAGTGTTGTTGATTTTGAAGGCAACCGGTTTGCCGGAGAAGTTCCTTCCTTTTTTGGTTATATTACAGGTCTGAAGGTGCTGTCCCTTGGTGGGAATCTTTTCTCTGGTTCAGTTCCGGAGAGTTTTAGCAACCTTTCGGCTCTCGAAACCTTGAGTTTGAGAGGTAATAACTTGAACGGAACTATGCCTGAGCAGCTACTGTCATTGAGCAATTTGTCAACACTTGACCTTAGTGGAAACAAATTTACGGGTCAAATTTCTGCAAGTATTGGGAATCTAAGCAGATTAATGGTTCTCAATCTGAGCGGCAATAGCTTTTCCGGGAAAATTCCGGCTCGTTTGGGAAATCTTTTCAGGTTAACTACTCTTGACTTGAGCAAACAAAATCTTTCTGGTGAATTGCCATTTGAGCTTTCTGGGTTGCCGAATCTGCAAGTTATTGCTCTGCAGGAGAACAAACTATCTGGGGATGTCCCTGAAGGATTCAGCAGTTTGATGAGTCTACGATATGTGAACCTGAGCTCTAATGCTTTTTCTGGGCACATTCCTGAAAATTATGGCTTTCTTCGATCACTGGTTGTTCTGTCATTGTCTCACAATCACATTACTGGAGTAATTCCTCCGGAGATTGGAAATTGCTCTGATATTGAAACTCTTGAGCTTAGTTCAAATTCTTTGACGGGTCATATTCCAACTGATCTCACTAGACTCTCCCATTTGGAAGTGCTTGATTTGAGTAGAAACAATTTAACTGGAGATATTCCTAGGGATATTTCCAAATGTTCTTCCTTAACTGCTCTGTTAGTGGATCACAACCGTCTTTCAGGTACTATACCGGAGTCACTGTCTGAGCTATCCAACTTGACAATGCTGGATCTCTCTGCTAACAACTTGAGCGGGGAAATATCGAGTAACATTTCCATGATCCCTAATCTATTGTACTTCAATGTCTCGGGGAATAACCTGGAAGGAGAGATACCGCCAACTTTGGGTTCTCGGTTCAACAATCCCTCTGCATTTGCAGATAATCAGAACTTATGTGGGAAACCATTGGATAAGGAGTGTGAGGAAATAGAAGACAAAGACAGGAAGAGGTTGATTGTGTTGATCGTTGTAATTGTTGCTGGAGTTTGCTTTCTGGCATTATGTTGCTGCTTCTACATTTTCAGCCTATTAAGGTGGCGTAAAAGGCTTAAAGAAGGGGCATCTGGGGAGAAAAAAAAGAGCCCTGCCAGGGCGAGTTCTGGAGCAAGCGGAGGTCGAGGCAGCACCGATAATGGTGGACCAAAACTGGTCATGTTCAACACCAAAATTACACTTGCTGAAACAATTGAAGCAACTAGGCAGTTCGATGAAGAAAATGTGCTGAGCAGGACAAGGTATGGCTTAGTATTCAAGGCCTGCTACAACGACGGAATGGTGCTTTCAATTCGCAGACTCCAAGATGGATCACTGGACGAAAACCTGTTCAGGAAAGAAGCAGAATCACTCGGGAAAGTGAAGCACCGGAATTTAACCGTTCTCAGAGGTTACTACGCTGGACCACCTGACATGAGGCTCCTGGTCTATGACTACATGCCCAATGGAAACCTTGCAACGCTCCTTCAAGAAGCTTCTCACCAAGACGGACATGTACTAAATTGGCCAATGCGTCACCTCATTGCACTCGGAATTGCCCGTGGCTTAGCCTTCCTACACCAGTCCTCAACGGTTCATGGGGACGTGAAACCACAAAGCGTCCTGTTCGATGCTGATTTTGAAGCCCATTTGTCAGATTTTGGGCTCGACCGTCTTACAGTAGCCACCCCGGGCGAACCCTCCACTTCAACCTCAGTTGGCACATTGGGTTACGTTTCACCAGAAGCTGTATTAACAGGGGAAGCCACGAAAGAGTCTGATGTGTACAGCTTCGGCATAGTGTTGCTCGAGCTTCTCACAGGGAAGCGACCGGTGATGTTCACGCAGGACGAAGATATAGTGAAGTGGGTGAAGAAACAACTACAAAGGGGTCAGATTACGGAGCTATTGGAGCCAGGATTGCTTGAGCTCGACCCAGAATCATCAGAGTGGGAAGAGTTCTTGTTGGGTGTTAAAGTAGGCTTGCTTTGCACAGCACCAGACCCTCTTGACCGACCAACCATGTCCGACATCGTGTTCATGCTCGAAGGTTGCCGTGTCGGCCCCGACATACCTTCCTCCGCCGATCCCACCTCTCAACCGTCTCCGGCATAA 3387 0.4745 MPPLFFLMVLCAPFLTCAERSGVAIAEIAALTAFKLNLQDPLGALSGWDPSSPAAPCDWRGVACTNNRVTELRLPRLQLSGRLTDRISDLRMLRKLSLRSNSFNGTIPSSLAKCTFLRAVFLQYNSLSGNLPPEIGNVTGLQILNVAQNHLSGRMPGDLPLRLKYVDLSSNSFSGEIPSTITNLSQLQLINLSYNQFSGEIPASFGELQQLEYLWLDHNLLGGTLPSALANCSSLVHLSVEGNALGGVIPAAIAALPKLQVISLSQNNLTGSIPASIFCNISVYAPSLRIVQLGFNTFTDIVEPESTTCFSVVQVLDIQHNSIHGRFPLWITNLSTLTVLYVSSNAFSGTIPPEIGNLARLEELKMANNSFTGMIAEEIKKCASLSVVDFEGNRFAGEVPSFFGYITGLKVLSLGGNLFSGSVPESFSNLSALETLSLRGNNLNGTMPEQLLSLSNLSTLDLSGNKFTGQISASIGNLSRLMVLNLSGNSFSGKIPARLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENKLSGDVPEGFSSLMSLRYVNLSSNAFSGHIPENYGFLRSLVVLSLSHNHITGVIPPEIGNCSDIETLELSSNSLTGHIPTDLTRLSHLEVLDLSRNNLTGDIPRDISKCSSLTALLVDHNRLSGTIPESLSELSNLTMLDLSANNLSGEISSNISMIPNLLYFNVSGNNLEGEIPPTLGSRFNNPSAFADNQNLCGKPLDKECEEIEDKDRKRLIVLIVVIVAGVCFLALCCCFYIFSLLRWRKRLKEGASGEKKKSPARASSGASGGRGSTDNGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENLFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSTVHGDVKPQSVLFDADFEAHLSDFGLDRLTVATPGEPSTSTSVGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1769 1128 FunFam Piriformospora indica-insensitive protein 2 472 569 - -
Bisa11g1769 1128 Gene3D Ribonuclease Inhibitor 454 743 IPR032675 -
Bisa11g1769 1128 Gene3D Ribonuclease Inhibitor 248 350 IPR032675 -
Bisa11g1769 1128 Gene3D Ribonuclease Inhibitor 160 247 IPR032675 -
Bisa11g1769 1128 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Bisa11g1769 1128 Pfam Leucine rich repeat 162 221 IPR001611 GO:0005515
Bisa11g1769 1128 Pfam Leucine rich repeat 602 659 IPR001611 GO:0005515
Bisa11g1769 1128 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Bisa11g1769 1128 FunFam Probable LRR receptor-like serine/threonine-protein kinase At4g36180 162 250 - -
Bisa11g1769 1128 Gene3D Ribonuclease Inhibitor 351 451 IPR032675 -
Bisa11g1769 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 617 740 - -
Bisa11g1769 1128 SMART LRR_sd22_2 670 693 - -
Bisa11g1769 1128 SMART LRR_sd22_2 208 234 - -
Bisa11g1769 1128 SMART LRR_sd22_2 454 480 - -
Bisa11g1769 1128 SMART LRR_sd22_2 406 432 - -
Bisa11g1769 1128 SMART LRR_sd22_2 622 651 - -
Bisa11g1769 1128 SMART LRR_sd22_2 256 283 - -
Bisa11g1769 1128 FunFam Nuclear pore complex protein NUP107 24 161 - -
Bisa11g1769 1128 SUPERFAMILY Protein kinase-like (PK-like) 815 1116 IPR011009 -
Bisa11g1769 1128 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 911 1114 - -
Bisa11g1769 1128 Gene3D Phosphorylase Kinase; domain 1 811 910 - -
Bisa11g1769 1128 ProSiteProfiles Protein kinase domain profile. 835 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1769 1128 SUPERFAMILY L domain-like 27 330 - -
Bisa11g1769 1128 FunFam Uncharacterized protein 256 471 - -
Bisa11g1769 1128 SUPERFAMILY L domain-like 495 732 - -
Bisa11g1769 1128 Gene3D Ribonuclease Inhibitor 25 159 IPR032675 -
Bisa11g1769 1128 FunFam Putative LRR receptor-like serine/threonine-protein kinase 798 910 - -
Bisa11g1769 1128 Pfam Protein kinase domain 845 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1769 1128 SMART LRR_typ_2 622 646 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 670 701 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 526 549 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 256 280 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 406 429 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 334 358 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 90 118 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 430 454 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 478 502 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 574 598 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 184 207 IPR003591 -
Bisa11g1769 1128 SMART LRR_typ_2 208 232 IPR003591 -
Bisa11g1769 1128 SUPERFAMILY L domain-like 309 574 - -
Bisa11g1769 1128 PRINTS Leucine-rich repeat signature 670 683 - -
Bisa11g1769 1128 PRINTS Leucine-rich repeat signature 625 638 - -
Bisa11g1769 1128 MobiDBLite consensus disorder prediction 788 814 - -
Bisa11g1769 1128 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Bisa11g1769 1128 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 547 - -
Bisa11g1769 1128 Gene3D Transferase(Phosphotransferase) domain 1 911 1114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1769 Bisa-ChrBisa11 39400344 39403730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1769 4 1128 Receptor kinase-like Gene Family AT4G36180 70.624 0.0 1540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Bisa11g1769 Pkinase 1.1e-32 CL0016