Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1736 ATGGCGGGATTGTTCTCACTAGGCGGCGGAGGCGGAGGAGGAGGAAGTAGGGGAGGAGGCAGCAACCAGGACGACCAACACCACCACCACAATAACCCCCCGACGGCGGTCCCTCATCCCGACTCCCTAAACTGGTACAAGCCGAATGAAGACGTGTCTGTATCTTCCTACAGAGGCTTCGAGCTCTGGAACCAACAGCATCCTGCAGAGCACCTCATCCCTCAAGCACGGCCTCTCCTCCACCAAGATCTCTACAACCCGGCGGTGGCGCTTGGGGTGGGGCCCAGCAGGAGCTCCGATGACCAGTCGTCGTCGAGATCGAGCATCATGGTGATGCGCTCCGCTGGAGGCAGCGGAGGAATAAGCTGCCAGGACTGTGGGAACCAAGCGAAGAAGGATTGCCCACACTATCGTTGCAGGACTTGCTGTAAGAGCCGCGGCTACGACTGCCAAACCCATGTCAGGAGCACTTGGGTTCCGGCGGCGAAGCGTCGCGAGCGACAACAGCAGCAACAGCAGATGGTTCAGCTTCGAGGAGAGAATCCCAAGAGGCAGAGAGATAGTAGTAATAATAACCCCAGCAGTTCCGCGCTTCTCGCTAGCACTCATTTACAAATGCTTACACACTCCTCATCAGAAGGGTTAGTAGAGCATGGGAATTTTCCGGCAGTGGTGAGGTCATCGGCGGAGTTCCGGTGCGTACGGGTTACCTCCTTCGACGGGGCGGAGGAAGAATACGCATATAAAACGGCTGTGAACATAGGAGGCCATGTATTCCAAGGAACTCTCTATGACCATGGCCCCGATACTAACTACATGTCCGGCGGAGACACCTCTTCCGGTGGCGGCACTGGAGGAGGAGTTCAGCCCTTGAACCTCATTGCGGCTTCCGGCGCTTCTGCTCTTGCAACAGCCGCAACAAGTGGTGGCGCCGCTGTGGTCTCCTCCACTGGGCCTCTCGTCGATCCTTCTTTGTATGCTGCTCCTCTCAACACCTTCATGGGTGGTAGTGGTACGCAATTCTTCCCTCACCCGAGATCTTGA 1044 0.5709 MAGLFSLGGGGGGGGSRGGGSNQDDQHHHHNNPPTAVPHPDSLNWYKPNEDVSVSSYRGFELWNQQHPAEHLIPQARPLLHQDLYNPAVALGVGPSRSSDDQSSSRSSIMVMRSAGGSGGISCQDCGNQAKKDCPHYRCRTCCKSRGYDCQTHVRSTWVPAAKRRERQQQQQQMVQLRGENPKRQRDSSNNNPSSSALLASTHLQMLTHSSSEGLVEHGNFPAVVRSSAEFRCVRVTSFDGAEEEYAYKTAVNIGGHVFQGTLYDHGPDTNYMSGGDTSSGGGTGGGVQPLNLIAASGASALATAATSGGAAVVSSTGPLVDPSLYAAPLNTFMGGSGTQFFPHPRS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1736 347 NCBIfam putative zinc finger domain, LRP1 type 122 164 IPR006510 -
Bisa11g1736 347 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 331 IPR007818 GO:0003700|GO:0006355
Bisa11g1736 347 MobiDBLite consensus disorder prediction 1 47 - -
Bisa11g1736 347 Pfam Domain of unknown function (DUF702) 120 269 - -
Bisa11g1736 347 MobiDBLite consensus disorder prediction 161 196 - -
Bisa11g1736 347 NCBIfam LRP1 C-terminal domain 221 268 IPR006511 -
Bisa11g1736 347 MobiDBLite consensus disorder prediction 163 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1736 Bisa-ChrBisa11 38850425 38852084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1736 1 336 C2H2 Transcription Factor Family AT5G66350 49.429 5.55e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bisa11g1736 DUF702 1.5e-59 No_clan