Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1711 ATGGAGAATTCACCTCTGAGTGGGGTTTTTTCTCAGCGTCCGAATTCCAGATTTTCAGCTAAGGAGGGAAGAAGTGGGTATGAGCCATCAGACACAGAGACAGAGTGGCAAGAAGTTTCAAGGCATGAACGAGAAAGAAAGAATCTGACCTTTAGGAGCAAAACCCCCATGGCACAACACAGGAGGCATGCTTCCAGGTATGAACTCGAAAGCTCATCTTCTCCACCACGAAGAAGACACCATAGCAAGTCACCTTATAAGCCCTTCAGAGCTGAGCCTGATGATTCACTGCCCATAACTGTTCTGCCAAAACCTGATCTTGGAAGGCACATATCTCCGTATAAATCCGAAAGAGAAACTCTAAGTAATGGGGTGAACAAGGTGAGCGAGAAACCAAACCATAAAAGATCAGTGACTGCTCCAAGACTAAGAGGAAGAGACAAGGAACAACAGAGCATTTACGAGCCAAAGATGGTAAACACTAAAGCCACGATTCAGAAACAGAGGGAAGGTTTTCATGGGATGACTCCTTCAATAGGAGAGATCAACGAGATGGTGGCTGAGGCAAAACTCTCAAAAGATCCTAACGATAATATGCTGTCAATAGAAAGTACAGAGTCGACTTTACCAGGTGATATTTTCTTTTCTCGTGAATACAATGCCATGCTAAAGCAGAAGACTTTATCAGCAAAACCCAACGTTAATGTTGAAGCCCAGTTTATTGGCCCAAGGCCTATTAAGATCCTTCCACAAAGAGGCACTCCCTATCATCATCATCAACAACCAAACAGAGGAAATGGTAGTGTCAATGTGAACAAACGAGGTAACTCATCTAGTACTGCTGTCTTGTCTAGATCAACAACAGTTTCTAGTACTGCCGTTAAAAGCAAAAAGGGTAGTGTCAAGCTGAGTAGCAGTAGTGTGAAGAGTGATGTTAGTGGAAAAACAAGTGCGAGCACGCTGAAATTCATAGCCAATCAAAAGAAGAAACAAGCAGATGCGTGGTTTGCTTGTATGAGAAAAGGGGCTTGCAGGACATCGAATAAATCGCCTGAACATCGAACGGTGGATGAGGCTTCTATCATTGAGAGAGCTTTAGTGGTCCAAAGTCTCCCACAATTCTGGGCAGATAAGTATCAACCTGCTTCACTGGATGGCTTCATTTGCCACCAACAGGAAGCTCAACTTCTCAAGGAACTTGTGTCTCAGGATGTATGCCCTCATATCTTGCTCAAAGGACCCAGTGGTTCAGGGAAAAGAGCTCTAGCAATGGCTCTTCTGCGAGAAATATACGGTGATGCATGTTCTAATGATAGAATGCCCAAGAAAGTCACTGTTCCAATAACGTCCAGTCCTCATCACGTGGAGCTCAATGTAAATCTAGAACCAAATGCTAGATATGCTTTGATGGGACTGGTCAAGGAAGTAAGCAGTGAATATGCGATTACCCCTGAAGTCAGCAATGTCAATTTCAAGTCAAACTATAAAGTAATGGTTCTTTACGAGGTTGACAAAGCAGCAGATAACATTCAACACTTGATCAAATGGGTCATAGATCGCTATTCTGATATATGCAAACTGGTGGTTTGCTGCGAAGATGATGCAGACATTCTTGAACCTGTTAAAAACCGGTTCAAATTGATTAACGTTGATGCTCCTCAAAGACAAGATATTATAGATGTTCTGATTCAGATAGCAAAGCAAGAGGAAATTGATCTATCAATGAACTTTGCTGCTAAGATTGCTACGAAGTCAAAGCAGAACCTCAGGAAAGCAATCATGGCTCTTGAAGCATGCAGAGCACACAACTATCCATTTTCAGAAGAACAATCGATACCGATTGGATGGGAGGAGACCCTGATAGAAATTTCCGCCGAGATCCTAAGCGATCCATCATATTCACGCTTGTTCTCAATAAGAGGGAAATTGCAGAAGCTTCTGGTGGATTTCGTCCACCCCAAACTGATTCTCCGGAGTCTTGTGGAACAGCTCCTAAAAGGAATTGAGAGCAGCTTGAAAAGGGAGCTCTTCTACTGGCATGCTTACTATGAGAAAAGACTCCCACCAGGAACTACAGCTTTACTGAAACTAGAAGAATTTGTGGCCAAGTTCATGAGCATATACAGAAAAAGCTCTGCCAGTCGGCAGCTTGTGTAG 2157 0.4316 MENSPLSGVFSQRPNSRFSAKEGRSGYEPSDTETEWQEVSRHERERKNLTFRSKTPMAQHRRHASRYELESSSSPPRRRHHSKSPYKPFRAEPDDSLPITVLPKPDLGRHISPYKSERETLSNGVNKVSEKPNHKRSVTAPRLRGRDKEQQSIYEPKMVNTKATIQKQREGFHGMTPSIGEINEMVAEAKLSKDPNDNMLSIESTESTLPGDIFFSREYNAMLKQKTLSAKPNVNVEAQFIGPRPIKILPQRGTPYHHHQQPNRGNGSVNVNKRGNSSSTAVLSRSTTVSSTAVKSKKGSVKLSSSSVKSDVSGKTSASTLKFIANQKKKQADAWFACMRKGACRTSNKSPEHRTVDEASIIERALVVQSLPQFWADKYQPASLDGFICHQQEAQLLKELVSQDVCPHILLKGPSGSGKRALAMALLREIYGDACSNDRMPKKVTVPITSSPHHVELNVNLEPNARYALMGLVKEVSSEYAITPEVSNVNFKSNYKVMVLYEVDKAADNIQHLIKWVIDRYSDICKLVVCCEDDADILEPVKNRFKLINVDAPQRQDIIDVLIQIAKQEEIDLSMNFAAKIATKSKQNLRKAIMALEACRAHNYPFSEEQSIPIGWEETLIEISAEILSDPSYSRLFSIRGKLQKLLVDFVHPKLILRSLVEQLLKGIESSLKRELFYWHAYYEKRLPPGTTALLKLEEFVAKFMSIYRKSSASRQLV 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1711 718 MobiDBLite consensus disorder prediction 61 77 - -
Bisa11g1711 718 SUPERFAMILY post-AAA+ oligomerization domain-like 615 708 IPR008921 GO:0003677|GO:0006260
Bisa11g1711 718 MobiDBLite consensus disorder prediction 247 289 - -
Bisa11g1711 718 FunFam replication factor C subunit 3 554 612 - -
Bisa11g1711 718 MobiDBLite consensus disorder prediction 256 289 - -
Bisa11g1711 718 MobiDBLite consensus disorder prediction 1 19 - -
Bisa11g1711 718 MobiDBLite consensus disorder prediction 1 149 - -
Bisa11g1711 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 607 IPR027417 -
Bisa11g1711 718 Gene3D - 615 708 - -
Bisa11g1711 718 MobiDBLite consensus disorder prediction 24 51 - -
Bisa11g1711 718 Gene3D - 555 612 - -
Bisa11g1711 718 MobiDBLite consensus disorder prediction 129 149 - -
Bisa11g1711 718 Gene3D - 373 553 IPR027417 -
Bisa11g1711 718 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 372 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1711 Bisa-ChrBisa11 38518979 38522721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1711 374 709 Core DNA Replication Machinery Family AT5G27740 41.429 5.92e-87 276