Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1702 ATGACTAAGTTCAGTGTCATTGTTTTTTTTGTAGAACTTGTTCTGTTCTGTTATTTTGATTGGCTAAATTCTTGCATCACCCTTGGTCGTGGTGGGATTTTGCACGACTTTGCAAAGATGAATGACCTGATGACGAAATCATTCTTAAGTTATGTTGAACTGAAGAAACAGGCCCAGAGGGACCTTGTAGCCGATCTTGACATCGAAGCAGGGCAACTCAACCCCATTGAAGACCAAAACCTATTCCAATTTTTCGAAGAAATTGATGCAATCAAAGTCGAAATGGAAGAGATTACCAATCTCTTATTCGATCTTCAACACCTGGATGACGAGACAAAGTCAACCCACAGCGCCAAAGTTCTTCGTGGGCTAAAAGACCGAATGGAATCAGACATGGTCACCATTCTTCGTAAAGCAAAGATCATCAAAGCAAGGCTAGAGTTGCTTGACAAATCCAACATAACAAATCGAAATTTATCAGAATCCTACAAAGAAGGAAGCCCGATTGACAGAACAAGGATATCTGTCACAGACGGTTTAAAAGTCAAGCTCAGGGGCTTAATGAACCATTTTCAGTCCTTGAGAAACCGGATTCTCCGTGATCACAAGGAGGACTTAAAGAGAAGGTACTACACTGCAACAGGGGAGGTACCAAGTGATGAGGTAATGGACAGGATGGTTTCTGGGAGTCTCAAAGTTGAGTTTTTTAAAGCAGAGGCCGATGTGGTGGGTGAGACTCAGGTCAGACACGAGGCCGTCATGGATATACAGAAAAGTTTGGATAAGCTTCACCAGGTTTTCCTTGACATGGCTATTATAGTTGAGACACAAGGCGAGAATGTGGAGAACATCGAAGATAATGTAGCCAATGCTAGGAGCTTCGTTCATGGTGGAACTAATAGTCTATACTACGCCAATCAGATGAAGAAGAACCAAAAATGGGCGTGGTGGGTTTGTGCTGTGGGGCTGATCATACTATTGGTGTGCCTAATTGCACTATTAGTTTCTTGA 1011 0.4253 MTKFSVIVFFVELVLFCYFDWLNSCITLGRGGILHDFAKMNDLMTKSFLSYVELKKQAQRDLVADLDIEAGQLNPIEDQNLFQFFEEIDAIKVEMEEITNLLFDLQHLDDETKSTHSAKVLRGLKDRMESDMVTILRKAKIIKARLELLDKSNITNRNLSESYKEGSPIDRTRISVTDGLKVKLRGLMNHFQSLRNRILRDHKEDLKRRYYTATGEVPSDEVMDRMVSGSLKVEFFKAEADVVGETQVRHEAVMDIQKSLDKLHQVFLDMAIIVETQGENVENIEDNVANARSFVHGGTNSLYYANQMKKNQKWAWWVCAVGLIILLVCLIALLVS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1702 336 SMART SynN_4 76 203 IPR006011 GO:0016020
Bisa11g1702 336 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 78 209 - -
Bisa11g1702 336 Pfam SNARE domain 279 328 IPR000727 -
Bisa11g1702 336 Gene3D - 237 336 - -
Bisa11g1702 336 PANTHER SYNTAXIN 91 325 IPR045242 -
Bisa11g1702 336 Pfam Syntaxin 83 278 IPR006011 GO:0016020
Bisa11g1702 336 CDD SNARE_syntaxin1-like 245 302 - -
Bisa11g1702 336 Gene3D - 77 208 - -
Bisa11g1702 336 SUPERFAMILY t-snare proteins 81 298 IPR010989 GO:0016020|GO:0016192
Bisa11g1702 336 SMART tSNARE_6 238 305 IPR000727 -
Bisa11g1702 336 FunFam Syntaxin 132 237 335 - -
Bisa11g1702 336 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 243 305 IPR000727 -
Bisa11g1702 336 CDD SynN 84 237 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1702 Bisa-ChrBisa11 38389466 38391911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1702 40 336 SNARE and Associated Proteins AT2G18260 57.329 4.32e-122 352