Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1696 ATGGAGGAATGGGGTTTTGGTGGTGGAGGAGAGTATGAGCTTGGACCCTTGGTGATTTTCCTCATTAAATATTCTCTGGAACTGTTGCTTCTTGTTCAGCTGCTTACTATGGTAGAGCTGCGAGAAATACGCCATGAAGGACTGACTTCTGCTTGCAATTTGGTGGACGTGCATCATAAAATGTGCTCAGAACTCAGGAAATTAGTTGATAGAATCTCAACGATATTACCAGATATAGAGGCTGCACGGCCTCGATGCTCATCCGGAATACAGTCTCTGTGCTCGCTAAACAGTGCACTTGATAAGGCCAAACTCCTTCTGCAACATTGCTGTGATTGTAGCAAACTATACTTGGCACTGACAGGAGACGGGGTGCTCTCAAGATGCCAAAAGGCAAGAAAATTATTGGAGCAAAGCTTGGACAAAATTCAGGGTATTGTTTCAGTTTTATTGGCTGCAAAGATTTCTCAAATAATTGATGATCTGGAATGTGTGACATTTGTCCTGGACTCGTCCGAAGAAGAAGCTGGGAGGATTCTCAGAGAATTGCTCCAGAAAAGTGCTTCAGCCTCAGATTCTATGGAAGATTTTGAGATTAAAGCTCTTCAGATCGCAGCTGTAAGACTTAATATCACATCCCAAAAGGCCATCTTAATAGAGAAACAGTCTATGAAAAAGTTGCTGGGAAAATTTGGGCCAAATGAACTCAAAAAGAAGATGATCTTGAGGCATCTTTTGTATTTTCTGAAAAAGCATGGAAACTCTATCATTCGAGAAGATATGGAAAAGGGTTGTCCTTGTAGTGATGAATCAGTTGCAACTGATAACTCCAGTCATGATTCTTGTAGAGGTATACCACCTGAGGAATACAAATGCCCTATATCTTCAAAATTGATGTATGATCCTGTTGTCATTGCTTCTGGGGCAACATATGAAAGGATGTGGATACAAAAGTGGTTCGATGAGGGTCATGAGTTTTGCCCAAAAACTGGAAAGGAACTGGCCAATATGTTGGTGACTACAAACATTGCCTTGAAAGAGCTGATATCAAAGTGGTGCAGAAATAACGAAGTCACCATTCCTGACCCTGGTAGGCGAGTAGAAAAGTTGAACGCATGGGAAGCTTCCTCCACTTCCATTAGGAGCTTTGACGGAGCTTCTATGAATAATTTGCATTTTAGTGACAAGTCTTTTGGATCAGTAGATAGTTACAATTCAGATTCCTCTCAGTCTTTGACTACTCATGACATAAATTCAATGTTGATGAAGACGAATGTCAATTCTCACGGTCATCAATCTCATGCACATGTAAATGATGCCGCTGTAATGCTTTTGTCTAAGTTCCCAGACCTTCAATTGGATTCTCAATGCCAGGTCCTTGAAAATCTGGAAATTTATTTGAAATACAATTGCCAAGATTTTTGTTCTTTGTCATCTGAGAATTTCATCGAATCACTCATCAAATTTCTGAACAATGCATATGGTCTACAAGACATAAAAGCTATCAGAGCTGGAACCCAGTTGCTCTTCTTATTTGTGAACAAATGCAGGAACAGCCCAGCTTGTCTAAGTGAGGATACATTCAGTATGTTAGGCAGTCTTATCGATTCAGAAGTTGTAGGCGAAGCTCTTGCCATATTGGAAGAACTGTCTGGGTGTCAGGATTTTAGAGCTAAAATTGCAGCATCCAGTGCACTCCCATCCATTTTAAAGATCCTTGACTCTGGGAACAGAGAGTTTCAACAAGAAGCTATTAGAATAATGTACAATTTGTCCTTCAACTGTGAAGCTTGTTCTTCCATGCTATCTGTCCAGTGCATCCCAGAATTGCTGCCCTTTTTTAAAGACGAGACTACGTTAATATACTGTATATGCATGTTGAAAAACCTTTCTGATACTGAAGAGGGTAGGGTTTCTGTTGCCAAAACTGAAGGATGCATATCAGCTATTGCTGAAATACTCGAGACTGGCAGTAAGGAGGAACAAGAACATGCACTGGCTGTTCTTCTCTCTTTATGCTCTAAACGTCTGGATTATTGTCAGTTAGTGATGGAAGAAGGGGTTATCTCTTCCCTTTTCTTTATCTCCACAAATGGAAGTGACAAAGGAAAGGTGATTGCATTGGAGTTGCTCCGACATTTGGGGGATTTATAA 2154 0.4062 MEEWGFGGGGEYELGPLVIFLIKYSLELLLLVQLLTMVELREIRHEGLTSACNLVDVHHKMCSELRKLVDRISTILPDIEAARPRCSSGIQSLCSLNSALDKAKLLLQHCCDCSKLYLALTGDGVLSRCQKARKLLEQSLDKIQGIVSVLLAAKISQIIDDLECVTFVLDSSEEEAGRILRELLQKSASASDSMEDFEIKALQIAAVRLNITSQKAILIEKQSMKKLLGKFGPNELKKKMILRHLLYFLKKHGNSIIREDMEKGCPCSDESVATDNSSHDSCRGIPPEEYKCPISSKLMYDPVVIASGATYERMWIQKWFDEGHEFCPKTGKELANMLVTTNIALKELISKWCRNNEVTIPDPGRRVEKLNAWEASSTSIRSFDGASMNNLHFSDKSFGSVDSYNSDSSQSLTTHDINSMLMKTNVNSHGHQSHAHVNDAAVMLLSKFPDLQLDSQCQVLENLEIYLKYNCQDFCSLSSENFIESLIKFLNNAYGLQDIKAIRAGTQLLFLFVNKCRNSPACLSEDTFSMLGSLIDSEVVGEALAILEELSGCQDFRAKIAASSALPSILKILDSGNREFQQEAIRIMYNLSFNCEACSSMLSVQCIPELLPFFKDETTLIYCICMLKNLSDTEEGRVSVAKTEGCISAIAEILETGSKEEQEHALAVLLSLCSKRLDYCQLVMEEGVISSLFFISTNGSDKGKVIALELLRHLGDL 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1696 717 Pfam Kinesin-associated protein (KAP) 545 687 - -
Bisa11g1696 717 SUPERFAMILY RING/U-box 282 362 - -
Bisa11g1696 717 Pfam U-box domain 287 357 IPR003613 GO:0004842|GO:0016567
Bisa11g1696 717 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 360 IPR013083 -
Bisa11g1696 717 SUPERFAMILY ARM repeat 531 715 IPR016024 -
Bisa11g1696 717 Gene3D - 465 717 IPR011989 -
Bisa11g1696 717 PANTHER U BOX DOMAIN-CONTAINING 60 713 - -
Bisa11g1696 717 ProSiteProfiles U-box domain profile. 285 359 IPR003613 GO:0004842|GO:0016567
Bisa11g1696 717 SMART arm_5 633 674 IPR000225 GO:0005515
Bisa11g1696 717 SMART arm_5 553 593 IPR000225 GO:0005515
Bisa11g1696 717 SMART arm_5 594 632 IPR000225 GO:0005515
Bisa11g1696 717 SMART Ubox_2 289 352 IPR003613 GO:0004842|GO:0016567
Bisa11g1696 717 CDD RING-Ubox_PUB 287 334 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1696 Bisa-ChrBisa11 38360079 38365053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1696 57 714 U-box Gene Family AT4G36550 38.053 1.50e-130 401
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1696 11 38360079 38365053 Bisa01g1850 01 32177155 32179096 CCT
Bisa11g1696 11 38360079 38365053 Bisa11g1696 11 38360079 38365053 ECH
Bisa01g1850 01 32177155 32179096 Bisa11g1696 11 38360079 38365053 ECH