Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1690 ATGGAATTCAGAGGCATAGACAAGGAAATAGAGATGTCATTACCTACCACTTCGAGTTATAAGCCCACCAATAGGGATTCTCCTTCTTCTCCAACTGTAGCTTCAACCATAGGGGAAAGAAGCAGTGATCAACCTCCTCAAATTTCAGACCGCAATCATCTCCATCCTCCTCCTCTGCCATCGAACCCGCTTCAGCAATTGCAGAGGCCCACAGGAGATCCAGATCCACAAAGCGTAACAACCACAAGCACGCCAATTGCTACCGGATCAAATCCAAGACCTCCTACGGTGACTACAATTAGGTACGGAGAATGCTTGAAGAATCACGCGGCGAGCATGGGAGGACACGTGGTGGACGGATGTGGCGAGTTCATGCCAAGCGGAGAAGAAGGCACTTCACAATCCTTGAGATGTGCTGCTTGTGACTGCCACCGTAATTTCCACCGCAAAGAGACCGACGGCGAACCACAAAATGTTCCGAATTACTATTACCCCTACCATTCCAACAACAAAGGCAATAACGCTCAAACTAGGATTCTTTCTCCTCCTCAGTTTCCTACACCCCCTCCTCTACATAATCATCATCATCGTCATCAACAGAGTAGATTCTCCGGAGGGCTGTTTCCGCCGCTGATGATGGCCTTCGGCGGAGGAGGAGGCGCGGCGGAGTCGTCGAGCGAGGATCTGAATATGTTTCAGTGTAATAATGTGGGAGGGCCAGGGTCCGGACAGGCGATGTTGTCATCGAAGAAGAGGTTTAGGACCAAGTTTAGCCAGCAGCAAAAGGATAGAATGATGGAGTTCGCTGACAAGTTGGGATGGAGGATCCAAAAACATGATGAGCAAGAGGTACAGCAGTTTTGTGATCAAGTGGGTGTGAAACGGCAGGTTTTCAAGGTGTGGATGCACAATAACAAGCAAGCCATGAAGAAGAAGCAAATGTAA 945 0.4899 MEFRGIDKEIEMSLPTTSSYKPTNRDSPSSPTVASTIGERSSDQPPQISDRNHLHPPPLPSNPLQQLQRPTGDPDPQSVTTTSTPIATGSNPRPPTVTTIRYGECLKNHAASMGGHVVDGCGEFMPSGEEGTSQSLRCAACDCHRNFHRKETDGEPQNVPNYYYPYHSNNKGNNAQTRILSPPQFPTPPPLHNHHHRHQQSRFSGGLFPPLMMAFGGGGGAAESSSEDLNMFQCNNVGGPGSGQAMLSSKKRFRTKFSQQQKDRMMEFADKLGWRIQKHDEQEVQQFCDQVGVKRQVFKVWMHNNKQAMKKKQM 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1690 314 NCBIfam homeobox domain, ZF-HD class 250 307 IPR006455 -
Bisa11g1690 314 SUPERFAMILY Homeodomain-like 241 311 IPR009057 -
Bisa11g1690 314 MobiDBLite consensus disorder prediction 65 97 - -
Bisa11g1690 314 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 101 151 IPR006456 -
Bisa11g1690 314 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 83 307 - -
Bisa11g1690 314 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 102 151 IPR006456 -
Bisa11g1690 314 FunFam Zinc-finger homeodomain protein 2 240 311 - -
Bisa11g1690 314 MobiDBLite consensus disorder prediction 12 49 - -
Bisa11g1690 314 MobiDBLite consensus disorder prediction 1 99 - -
Bisa11g1690 314 Pfam ZF-HD protein dimerisation region 100 152 IPR006456 -
Bisa11g1690 314 Gene3D - 239 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1690 Bisa-ChrBisa11 38247986 38248930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1690 52 314 ZF-HD Transcription Factor Family AT2G18350 46.909 1.70e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa11g1690 ZF-HD_dimer 1.1e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1690 11 38247986 38248930 Bisa11g1690 11 38247986 38248930 ECH