Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1653 ATGCCGGTTGATGTTGATAATTCTTCCACAGCTTCAGGGGAAGCTAGCGTCTCTTCCTCTGGCAATCAGACAGTGCCTCCCAAGTCCACTGCCAAGAAAAAGCGAAATCTTCCAGGAATGCCAGATCCGGACGCAGAGGTGATTGCCCTGTCTCCGAAGACTCTGTTGGCCACAAACCGATTCGTTTGTGAAATCTGCAACAAAGGATTTCAGAGGGATCAGAATCTTCAACTCCATCGACGGGGTCATAATCTGCCATGGAAGCTTAGGCAGAGGTCCAGCAAGGAGGTGAGGAAAAGAGTCTATGTCTGTCCCGAGCCAAGCTGTGTTCATCATGATCCTTCCAGAGCTTTGGGTGATCTCACCGGGATAAAGAAGCATTTCTGTAGAAAACACGGGGAAAAGAAGTGGAAATGTGACAAGTGTTCGAAGAAATACGCAGTTCAGTCAGATTGGAAGGCTCACTCTAAGATTTGTGGCACCAGAGAGTATAAATGCGATTGTGGGACTTTGTTTTCGAGGAGGGATAGCTTTATCACGCACAGGGCATTCTGTGATGCGCTGGCGGAGGAGAGTGCAAGAAATCAGACTCAGCCACAGACTCAGACTCAGGCTGCTGATAAGCCTAATTCCGAGTCTAACCCATCAATTGTAACCGGCGATTCTTCCCCTACGGCGCCGGCATCGATTCCATCACCGGGACCGGCCCAAGCACCACCGCCACCGCCTGCGCCTGCGGACCCGCCAGCTCCTCCTCAGTCAAATAGTGTCATACCTTCTTCCTTGCAGACGAAAAACCCAGAGTTGCCAGAAAATCCCCCACAAATTATAGAGGAACCGCAGGCTACTACTGCTCTAAATGGCAGCTGTAGCAGCAGCAGTACTAGCTCAACCAGCAATGGTGGTGGTACTAGCTGTAGTGTATTTGCAAGCTTGTTTGCTTCCTCAACTGCATCTGGGAGCCTGCAATCCCCTCAACCTCAACCTCAACCACCTGCATTTACTGACCTAATAAGGGCCATGGCACATCCAGATCGTCCAGCAGAGCTCACAGGGCCTTCATCTTCAGAGCCCATTTCTCTCTGCCTTGCCACTAATCATGGGTCATCAATTTTTGGTACAGGAGGGCAAGAACGTCGCCAGTATGCCCCACCACCACAGCCAGCTATGTCTGCCACTGCACTACTACAGAAAGCTGCTCAAATGGGTGCAGCAGCTACAAATGCATCATTGCTCCGTGGGTTGGGTATAGTGTCATCTTCATCGTCGACTTCATCGTTAAGCCAGCAAGATAATGTGCCATGGGGTCAAAGGCAAGTAGAACCAGAGAGTGCCTCAGTTGCTGCAGGGCTTGGGCTTGGGCTTCCGTGTGATGGTGGCTCTGGACTGAAGGAATTAATGATGGGGACACCCTCCATGTTTGGTCCAAAGTACACAACACTTGACTTTCTGGGATTGGGGATGGCTGCTGGTGGTGGTACCCCCAGTGGAGGCTTATCAGCGCTTATCACTTCAATTGGGAGTGGTCTGGATGTTACTGCTGCAGCAACACCCTTTGGTAGTGGAGAGTTCTCTGGTAAAGACATGGGGAGGAGCTCATAG 1602 0.51 MPVDVDNSSTASGEASVSSSGNQTVPPKSTAKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARNQTQPQTQTQAADKPNSESNPSIVTGDSSPTAPASIPSPGPAQAPPPPPAPADPPAPPQSNSVIPSSLQTKNPELPENPPQIIEEPQATTALNGSCSSSSTSSTSNGGGTSCSVFASLFASSTASGSLQSPQPQPQPPAFTDLIRAMAHPDRPAELTGPSSSEPISLCLATNHGSSIFGTGGQERRQYAPPPQPAMSATALLQKAAQMGAAATNASLLRGLGIVSSSSSTSSLSQQDNVPWGQRQVEPESASVAAGLGLGLPCDGGSGLKELMMGTPSMFGPKYTTLDFLGLGMAAGGGTPSGGLSALITSIGSGLDVTAAATPFGSGEFSGKDMGRSS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1653 533 FunFam protein indeterminate-domain 5, chloroplastic-like 115 194 - -
Bisa11g1653 533 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Bisa11g1653 533 Gene3D Classic Zinc Finger 115 196 - -
Bisa11g1653 533 MobiDBLite consensus disorder prediction 191 275 - -
Bisa11g1653 533 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Bisa11g1653 533 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 18 492 IPR031140 -
Bisa11g1653 533 SMART c2h2final6 61 83 IPR013087 -
Bisa11g1653 533 SMART c2h2final6 102 132 IPR013087 -
Bisa11g1653 533 SMART c2h2final6 137 157 IPR013087 -
Bisa11g1653 533 MobiDBLite consensus disorder prediction 256 270 - -
Bisa11g1653 533 MobiDBLite consensus disorder prediction 1 45 - -
Bisa11g1653 533 MobiDBLite consensus disorder prediction 191 227 - -
Bisa11g1653 533 Gene3D Classic Zinc Finger 41 107 - -
Bisa11g1653 533 Pfam Zinc finger, C2H2 type 61 83 IPR013087 -
Bisa11g1653 533 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Bisa11g1653 533 MobiDBLite consensus disorder prediction 1 30 - -
Bisa11g1653 533 MobiDBLite consensus disorder prediction 228 255 - -
Bisa11g1653 533 FunFam protein indeterminate-domain 12-like 40 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1653 Bisa-ChrBisa11 37715688 37718013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1653 1 533 IDZ Gene Family AT5G66730 60.289 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa11g1653 zf-C2H2 0.0054 CL0361