Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1645 ATGCAACAGGAAAACGACAAACACAAAGCTGCTCCTGCGATGGCTGCGAAACATGCCACACTGCTCTCGGACACTCAGCTTCTCTTCCATATTTCCCTCTCTTACTCCATCGACACTTCCCGAGACACTAATGACGTTCCTGATTTTAAGGATGATTTTGTCTTCAACATCCACCCTTCTTTGCTTCTTGACGCTGCCAAACTCGAAATTGGTCCAGTGATCGGAGAAGGGCCTCGTTCGACGGTGTATCAAGGATGGTATGAATCGAGGCCTGTGGCTGTTAAGGTTATACTCCCATACCGAGCGTCTGAAGCAACTCGAGAGTGTAAGGAGAAATTTCAAAGGGAGATTATGCTGCTTTCTAAGATCAAGCATGAAAATGTCGTGGAGTTCATTGGTGCTTTAGTGGATCCAACAATGATGATAGTCACAGAACTTATGAGAGGAGGCTCGCTTCAGAGACACTTGAGAGAAATGCATCCAGATCCTCTAGATTTGGAGCTCGCTGTATGTTATGCCCTGGATATTTCTCGAGCTATGGAGTATTTGCATGCAAATGGCATCATTTACAGAGATCTGAAGCCTGAAGATAGGAAGCATATCAAACTTGCTGATTTTGGGCTGGCTAGAGAGGAGACTTGTAAAGAGATGATTAGTGAGGCTGGTACTAACCGCTGGATGGCTCCTGAGGATCCACTCCCAAAGGGAGCAAATAAATGCTGTAATCACAAGGCTGATGTATACAGCTTTGCAATAGTTCTGTGGACTTTGGTCACTAACAGAATGCCGTTTAGAGGAAGGAGTGATCTGATGGCTGCATATGCTTCCGCAAAAAACATGAGGCCCAGCGTGGAAGAGTGTCCAGAAGATTTAGTTCCTCTGGTGGAGTTGTGTTGGGCAGCAGACCCAGAGAACCGACCAGAGTTCAAGGACATCACAAGCACACTTGTAACGTTGTTCCACAAGTGCTGCTCTACTACACCCACCCCGACCCCACTTCCCAGTAGTATTATCGAGACTCAAAACCCAAATGGCTCCACAGTTCTGGAACTAAACGCCAGCCAAGGGGCCCTAAGCCCATCACCCATTGTCACTCCGCTAAGCCAGCCCAAGCCCAATAAGCCCACCAAGCGCAGCTGCTGCTTCTCTCTACTCAGATGCTGCTGCCTCTTTCTCCTCAGATGCTGCTTCTGCTGTTGA 1200 0.4783 MQQENDKHKAAPAMAAKHATLLSDTQLLFHISLSYSIDTSRDTNDVPDFKDDFVFNIHPSLLLDAAKLEIGPVIGEGPRSTVYQGWYESRPVAVKVILPYRASEATRECKEKFQREIMLLSKIKHENVVEFIGALVDPTMMIVTELMRGGSLQRHLREMHPDPLDLELAVCYALDISRAMEYLHANGIIYRDLKPEDRKHIKLADFGLAREETCKEMISEAGTNRWMAPEDPLPKGANKCCNHKADVYSFAIVLWTLVTNRMPFRGRSDLMAAYASAKNMRPSVEECPEDLVPLVELCWAADPENRPEFKDITSTLVTLFHKCCSTTPTPTPLPSSIIETQNPNGSTVLELNASQGALSPSPIVTPLSQPKPNKPTKRSCCFSLLRCCCLFLLRCCFCC 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1645 399 PRINTS Tyrosine kinase catalytic domain signature 144 157 IPR001245 GO:0004672|GO:0006468
Bisa11g1645 399 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Bisa11g1645 399 PRINTS Tyrosine kinase catalytic domain signature 182 200 IPR001245 GO:0004672|GO:0006468
Bisa11g1645 399 PRINTS Tyrosine kinase catalytic domain signature 245 267 IPR001245 GO:0004672|GO:0006468
Bisa11g1645 399 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 64 317 - -
Bisa11g1645 399 Pfam Protein tyrosine and serine/threonine kinase 69 316 IPR001245 GO:0004672|GO:0006468
Bisa11g1645 399 ProSiteProfiles Protein kinase domain profile. 68 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1645 399 CDD STKc_MAP3K-like 74 316 - -
Bisa11g1645 399 SUPERFAMILY Protein kinase-like (PK-like) 63 340 IPR011009 -
Bisa11g1645 399 Gene3D Transferase(Phosphotransferase) domain 1 59 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1645 Bisa-ChrBisa11 37662907 37666803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1645 51 350 MAP Kinase Kinase Kinase AT5G66710 50.482 1.81e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa11g1645 PK_Tyr_Ser-Thr 8.8e-48 CL0016